| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1962 |
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| Symbol | |
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| ID | 8132905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2255394 |
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| End bp | 2256143 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865251 |
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| Product | MltA-interacting MipA family protein |
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| Protein accession | YP_003017539 |
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| Protein GI | 253688349 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3713] Outer membrane protein V |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.433624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAAAAC CTCAACTATG TATGCTGGCC GCGCTGATTT CTGGCGCTGT GCTCCTGCCT
TCAGCCTATG CCGCAGATGT CTCTCTGGGC CTTGGCGCTG CGGGTTCAAC GTCTGTATAC
CGTGGTGTTG ATAATGACGT TTATCCGCTT CCTGTACTGA ATTATGAAAG TGAAAATTTT
TATTTCCGCG GGCTGGGTGG TGGGTACTAC CTGTGGAATG ACGGCGCAAA TCGTCTCTCT
TTAACGGCCT ACTACCTGCC TTTAGGGTTT AAGCCGGGAG ATAGCGACGA TCTGCGGATG
AAACAGTTAG ATAAACGTCG CGGTACGCTG ATGGCGGGCG CGGCCTACCG TCATATCGCC
GATTGGGGCG AAATCCGTAC CGTACTGGCA GGCGACACGC TGGATTATAG CAATGGTTTT
GCGTGGGATA CCGCCTATCT TTACCGCTTC TCAATGGGCG ATTTGAGCAT CACTCCGGGT
ATCGGTGCGA CCTGGTTCAG TGAAAACATG AACCAGTATT ACTACGGCGT CAGCGCACAG
GAATCCGCGC GTTCTGGCTT TAACCAGTAT AGTCCTGGTG ATGGCTGGGC TCCGTATCTT
GAACTGAGCG CCGGTTATCA GATTAACCAA AGCTGGAGCG CCTGGGCCGT GGGTCGTTAC
ACACGTTTGT CTGACGAAAT GAAGGACAGC CCGATTGTCG ATAGTAACCA CAGCATCTTA
ATGAGCGCAG GTGTCAGCTA TCGCTTCTGA
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| Protein sequence | MKKPQLCMLA ALISGAVLLP SAYAADVSLG LGAAGSTSVY RGVDNDVYPL PVLNYESENF
YFRGLGGGYY LWNDGANRLS LTAYYLPLGF KPGDSDDLRM KQLDKRRGTL MAGAAYRHIA
DWGEIRTVLA GDTLDYSNGF AWDTAYLYRF SMGDLSITPG IGATWFSENM NQYYYGVSAQ
ESARSGFNQY SPGDGWAPYL ELSAGYQINQ SWSAWAVGRY TRLSDEMKDS PIVDSNHSIL
MSAGVSYRF
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