| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1958 |
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| Symbol | |
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| ID | 8132901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2249722 |
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| End bp | 2250924 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644865247 |
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| Product | drug resistance transporter, Bcr/CflA subfamily |
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| Protein accession | YP_003017535 |
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| Protein GI | 253688345 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.799827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGAT TTGTTCTGAT TTTACTGACT CTGGTTCTGC TCGGCCCTCT GGGTATCGAC
ATCTATTTGC CGCTTATTCC TGCCATCGCC GTGGCGCTAA ACAGCCCTGA ATCGCTGATT
CAGTCCACCG TCGCCCTGTT TATTCTGATC ATGGGATTAG GCCAGCTTCT GGCTGGGCCG
CTGGTCGACA AATACGGTCG TCGCCCGATG GCATTGGCTG GCGTGATGAT CTATATCATT
GGAGCTGTCA TTGCCGCGCT GGCGACCAGC GCCACACTGT TCGTTCTCTC ACGCCTTTTT
CAGGGTATGG CCGTCTGCTG TACCGCCGTT GCCATTTTCA GCAGCGTCCG TGACAAGCTA
AACGGCGACG ATGCCGCCAG AACCTATGGT TTTCTCAACG GCACGCTGAA TATTGTGCCG
GCGCTGGCGC CGCTATTAGG CGGTCTGTTG GCCGAAGCCT TCGGCTGGCG TGCCCCCTTC
TGGTTCCTCG CAGGCTACAG CATTCTGGTT CTGGTAATCG TCATCCGTTT TCTGCCCGAA
ACGCGCCCAG ACTCAACGTT GCCCGTGCAC GGCTTACCGC TGCGCCAATA TGCCCGCCTG
TTATCCGATC GCCACTTTCT AGGGTTCGCG TCAGTCAACG CAGGCGCAAT GGGGATGGCG
TTAACCTACG TCACCTTTTC CCCTGTGGTG CTGATGAATC AGGCACAGCT GACGCCGCTT
GAGTTTTCGA TTGCCTTCGG CGCAAACGGC TTTTGGATCA TGCTGGTCAG CTTTTTTGCA
AACCGCATTA TCCGCAAAGT CGGCCGTCCA CGCTGTCTGG CTGTGGGTAG CCTGCTGATG
GGCGCGGGTT TCCTTTCGCT GCTTGGTGGT GTTCTGCTCT TACCTGACGC GCTGCAAAAC
ACCTGGCCGA CCTACATGCT GCCCGTCGCC TTGGCCTGTG CCGGTCTGGC ATTTTTGATC
GGTCCATCCA CCAGCTATGC GCTGGAGCCT TATTCCAATG AGGCGGGGAT TGCGTCGGCG
ATGGTAGGAT TCGTGCAAAT GGCAGGGGGT GCGGCGCTGG GGTTGATGGC GATGGCGCTC
CCTCTGCCGT CAAAAATATC ACTGGCACTG GTGATGCTCT GTGCCGCTCT GCTGGCAATA
CGCGCCCGTC TGCTCACGCG GCACCACAAG GGCAGCATTA CATCACTGCC CCGCACTGAG
TAA
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| Protein sequence | MQRFVLILLT LVLLGPLGID IYLPLIPAIA VALNSPESLI QSTVALFILI MGLGQLLAGP
LVDKYGRRPM ALAGVMIYII GAVIAALATS ATLFVLSRLF QGMAVCCTAV AIFSSVRDKL
NGDDAARTYG FLNGTLNIVP ALAPLLGGLL AEAFGWRAPF WFLAGYSILV LVIVIRFLPE
TRPDSTLPVH GLPLRQYARL LSDRHFLGFA SVNAGAMGMA LTYVTFSPVV LMNQAQLTPL
EFSIAFGANG FWIMLVSFFA NRIIRKVGRP RCLAVGSLLM GAGFLSLLGG VLLLPDALQN
TWPTYMLPVA LACAGLAFLI GPSTSYALEP YSNEAGIASA MVGFVQMAGG AALGLMAMAL
PLPSKISLAL VMLCAALLAI RARLLTRHHK GSITSLPRTE
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