| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1948 |
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| Symbol | |
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| ID | 8132891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2240445 |
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| End bp | 2241164 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644865237 |
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| Product | fatty acid metabolism regulator |
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| Protein accession | YP_003017525 |
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| Protein GI | 253688335 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02812] fatty acid metabolism transcriptional regulator FadR |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00527579 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTATAA AGGCGCAAAG TCCGGCTGGA TTCGCGGAAG AATACATTAT CGAAAGTATA
TGGAATAACC GTTTTCCTCC TGGCTCTATT TTGCCCGCGG AAAGAGAACT TTCCGAACTG
ATCGGCGTGA CCCGTACTAC CCTGCGCGAA GTGCTTCAGC GCCTGGCTCG CGATGGTTGG
CTGACGATAC AGCACGGGAA GCCAACAAAG ATTAACAATT TTTGGGAAAC TTCCGGGCTC
AATATTCTGG AAACGCTGGC ACGGCTCGAT CACGACAGCG TGCCGCAGCT GATCGATAAC
CTGCTGGCCG TGCGAACCAA CATCGCCGCC ATCTTTATTC GGACGGCGTT ACGGCATAAC
CCGGAAAAGG TGCGTGACGT GTTGACTCAG GCAAACGCGG TAGACGATAG CGCAGAAGCC
TTTGCGCAAC TGGATTACAA CGTGTTCCGC GGTCTGGCTT TTGCTTCCGG CAATCCGATT
TATGGCCTGA TCCTGAACGG TTTGAAGGGG TTATATATTC GCGTAGGGCG CTACTATTTT
TCCAACCCGG AAGCCCGCAA GCTGGCGGTG AATTTTTACG GTCGGTTGGA AGCATTGCGC
AGCGAAGAGT TGTACGATCA GGTAATGGAT GTCGTCAGAC ATTACGGTAA AGAAAGCGGA
GCGATCTGGC ACAGTATGCA GAGCGCTATC CCACGGGATA TCGCGGAAGT TCGCCGCTAA
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| Protein sequence | MVIKAQSPAG FAEEYIIESI WNNRFPPGSI LPAERELSEL IGVTRTTLRE VLQRLARDGW
LTIQHGKPTK INNFWETSGL NILETLARLD HDSVPQLIDN LLAVRTNIAA IFIRTALRHN
PEKVRDVLTQ ANAVDDSAEA FAQLDYNVFR GLAFASGNPI YGLILNGLKG LYIRVGRYYF
SNPEARKLAV NFYGRLEALR SEELYDQVMD VVRHYGKESG AIWHSMQSAI PRDIAEVRR
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