| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1928 |
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| Symbol | |
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| ID | 8132871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2221231 |
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| End bp | 2222595 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644865217 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_003017505 |
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| Protein GI | 253688315 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.38785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATAAGCG TTTTCGACAT GTTTAAGATC GGTATTGGCC CCTCTAGCTC TCATACGGTT
GGACCGATGA AAGCCGGTAA GCAATTTGTC GATGAATTGA TCAACCAGAA TTTACTGACC
GCGACGACGC GTATTGCCGT CGATGTGTAT GGCTCGCTGT CGCTAACGGG TAAAGGTCAC
CACACAGATA TCGCCATCAT CATGGGTCTG GCGGGCAACA TGCCGGATAC GGTTGATATT
GACGCCATCC CCGGCTTTAT CCGCGATGTT GAGCAACGCG AACGCCTGCT GCTGGCTAAT
GGGCAGCATG AAGTCGATTT CCCACGCGAA GGCGGCATGG TTTTCCGCAG TGAAAATCTG
CCATTGCACG AAAACGGCAT GACCATCACT GCCTTTGCCA GCAATAAAGA AGTTTATAGC
AAAACCTATT ACTCCATCGG CGGTGGTTTT ATCGTCGATG AAGAGCATTT TGGCAAAGAC
ACCGCCACTG ACGTCTCCGT TCCTTATACA TTCCATTCCG CCAAAGAGAT GCTGGAGCAC
TGTAAACAGA GCGGTCTTTC GCTTTCTGGA ATGGTGATGC GTAACGAACT GGCGCTACAT
AGCCGTCAGG AGATTGACGC GTACTTTGCC GATATCTGGC AGACGATGCG TGCTTGTATC
GATCGCGGCA TGAACACCGA AGGCGTGCTG CCGGGCCCGC TGCGCGTACC GCGTCGTGCC
TCTGCACTGC GTCGTATGCT GGTTTCTTCC GACAAGTTGT CTAACGACCC AATGAACGTG
GTGGACTGGG TTAATATGTT CGCACTCGCG GTGAATGAAG AAAACGCCGC AGGCGGCCGC
GTGGTTACCG CGCCAACAAA CGGCGCATGC GGCATCGTCC CCGCCGTTCT TGCCTATTAC
GACCACTTTA TCGAACCGGT TAGCCCGACC ATTTATATCC GCTATTTCCT CGCGGCAGGC
GCGGTCGGCA TTCTGTATAA AATGAACGCC TCCATCTCCG GTGCCGAAGT GGGCTGTCAG
GGTGAAGTCG GCGTGGCCTG CTCGATGGCC GCCGCCGGGC TGGCAGAACT GATGGGCGCC
AGCCCGGAAC AAGTTTGCGT CGCTGCCGAG ATCGGTATGG AACACAACCT GGGCTTAACC
TGCGATCCGG TTGCTGGTCA GGTACAGGTT CCGTGCATCG AACGTAACGC GATTGCTTCC
GTTAAGGCGA TTAACGCCGC TCGCATGGCA ACCCGCCGCA CCAGCGAACC CCGCGTCTCG
CTGGATAAGG TTATTGAAAC CATGTACGAA ACGGGTAAAG ACATGAACGC CAAATACCGC
GAAACCTCAC GAGGCGGGCT GGCGATCAAA GTACAGTGTG ATTAA
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| Protein sequence | MISVFDMFKI GIGPSSSHTV GPMKAGKQFV DELINQNLLT ATTRIAVDVY GSLSLTGKGH
HTDIAIIMGL AGNMPDTVDI DAIPGFIRDV EQRERLLLAN GQHEVDFPRE GGMVFRSENL
PLHENGMTIT AFASNKEVYS KTYYSIGGGF IVDEEHFGKD TATDVSVPYT FHSAKEMLEH
CKQSGLSLSG MVMRNELALH SRQEIDAYFA DIWQTMRACI DRGMNTEGVL PGPLRVPRRA
SALRRMLVSS DKLSNDPMNV VDWVNMFALA VNEENAAGGR VVTAPTNGAC GIVPAVLAYY
DHFIEPVSPT IYIRYFLAAG AVGILYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELMGA
SPEQVCVAAE IGMEHNLGLT CDPVAGQVQV PCIERNAIAS VKAINAARMA TRRTSEPRVS
LDKVIETMYE TGKDMNAKYR ETSRGGLAIK VQCD
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