| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1910 |
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| Symbol | |
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| ID | 8132853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2204369 |
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| End bp | 2205205 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644865199 |
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| Product | 5-keto-4-deoxyuronate isomerase |
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| Protein accession | YP_003017487 |
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| Protein GI | 253688297 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3717] 5-keto 4-deoxyuronate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000905199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGTTC GTCAAAGCAT TCACAGCGAT CACGCGAAGC AACTGGATAC CGCCGGCCTA
CGTCGTGAAT TTCTGATCGA GCAGATTTTT TCTGCCGATG CCTACACTAT GACCTATAGC
CACATCGACC GAATCATCGT CGGTGGCATT ATGCCCGTAC ACAGCGCCGT GACGATTGGC
GGTGAAGTGG GCAAACAACT CGGCGTCAGC TATTTCCTGG AACGTCGCGA ATTCGGCGCC
ATCAATATTG GTGGCGCAGG CATCGTGACT GTCGATGGCG AACGCTATGA CGTGGGTAAT
GAAGAAGCAA TCTATGTTGG TATGGGCGTG AAAGACGTGC AATTTACCAG CGCCGATGCG
GCTAATCCCG CCAAGTTCTA CTACAACAGC GCGCCAGCAC ATACGACATA CCCTACCCGC
AAGATTACTC AGGCTGACGC CTCACCACAA ACTGTGGGTG AAGATGCCAG TTGCAATCGC
CGTACAATTA ATAAATACAT CGTTCCCGAT GTACTGCCGA CCTGCCAGCT CACAATGGGA
TTAACCAAGC TGGCCGAAGG CAGCCTATGG AACACCATGC CTTGTCATAC GCATGAGCGC
CGAATGGAAG TCTATTTCTA TTTTGACATG GACGATGAAA CGGCCGTTTT CCACATGATG
GGTCAGCCGC AAGAAACCCG TCACATAGTT ATAAAAAACG AGCAGGCGGT GATTTCACCG
AGCTGGTCGA TTCATTCCGG TGTTGGCACC AGACGCTACA CCTTCATCTG GGGCATGGTT
GGCGAGAATC AGGTTTTCGG TGACATGGAT CACGTCAAGG TTAGCGAGTT ACGTTAA
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| Protein sequence | MQVRQSIHSD HAKQLDTAGL RREFLIEQIF SADAYTMTYS HIDRIIVGGI MPVHSAVTIG
GEVGKQLGVS YFLERREFGA INIGGAGIVT VDGERYDVGN EEAIYVGMGV KDVQFTSADA
ANPAKFYYNS APAHTTYPTR KITQADASPQ TVGEDASCNR RTINKYIVPD VLPTCQLTMG
LTKLAEGSLW NTMPCHTHER RMEVYFYFDM DDETAVFHMM GQPQETRHIV IKNEQAVISP
SWSIHSGVGT RRYTFIWGMV GENQVFGDMD HVKVSELR
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