| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1907 |
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| Symbol | |
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| ID | 8132850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2200684 |
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| End bp | 2201574 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644865196 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003017484 |
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| Protein GI | 253688294 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0961638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAA ACAGAATGCT GGGGTTAGCC TATATCTCCC CCTATATTAT AGGGCTGATA
GTTTTTACCG CTTTCCCCTT TGTTTCGTCA TTTATCCTCA GTTTTACTGA GTATGATTTG
ATAAATCCGC CTGAATTTAC GGGACTAGAA AACTATCACC GCATGTTCCT GGAGGATGAC
CTCTTTTGGA AATCAATGGG CGTTACCTTT GCCTATGTAT TTCTGACCAT TCCATTGAAA
TTAATCTTCG CGCTGTTAAT TGCGTTTGTA CTTAATTTCA AATTGCGTGG TATCGGTTTC
TTCCGTACTG CTTACTATGT GCCTTCTATT CTGGGCAGCA GCGTGGCAAT CGCCGTATTG
TGGCGTGCAC TGTTCGCCAT CGATGGTTTG TTAAACAGCT TCCTCGGCGT GTTTGGCTTT
GACGCCATCA ACTGGCTGGG CGAACCGTCT CTGGCACTGA TGTCGGTAAC ACTGTTGCGC
GTATGGCAGT TCGGTTCCGC GATGGTTATC TTCCTGGCTG CATTGCAGAA CGTTCCGCAA
TCACAGTATG AAGCGGCAAT GATCGACGGC GCATCCAAAT GGCAAATGTT CCTGAAAGTA
ACGGTACCGC TGATTACACC AGTTATCTTC TTTAACTTTA TCATGCAGAC CACTCAGGCA
TTCCAGGAGT TTACGGCGCC TTACGTCATT ACTGGCGGCG GTCCAACACA CTACACCTAC
CTGTTCTCGC TCTATATCTA CGATACGGCG TTCAAGTATT TCGATATGGG TTACGGTGCT
GCGTTGGCAT GGGTTCTGTT CCTGGTTGTT GCAGTATTTG CGTCTATCTC CTTTAAGTCG
TCGAAATACT GGGTGTTCTA CTCCGCTGAT AAAGGAGGAA AAAATGGCTG A
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| Protein sequence | MNENRMLGLA YISPYIIGLI VFTAFPFVSS FILSFTEYDL INPPEFTGLE NYHRMFLEDD
LFWKSMGVTF AYVFLTIPLK LIFALLIAFV LNFKLRGIGF FRTAYYVPSI LGSSVAIAVL
WRALFAIDGL LNSFLGVFGF DAINWLGEPS LALMSVTLLR VWQFGSAMVI FLAALQNVPQ
SQYEAAMIDG ASKWQMFLKV TVPLITPVIF FNFIMQTTQA FQEFTAPYVI TGGGPTHYTY
LFSLYIYDTA FKYFDMGYGA ALAWVLFLVV AVFASISFKS SKYWVFYSAD KGGKNG
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