Gene PC1_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1893 
SymbolpheT 
ID8132836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2184974 
End bp2187361 
Gene Length2388 bp 
Protein Length795 aa 
Translation table11 
GC content54% 
IMG OID644865182 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionYP_003017470 
Protein GI253688280 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCA GTGAACTCTG GTTACGCGAG TGGGTAAACC CGGCGGTTGA CAGTGAAACG 
CTATCCGAAC AAATCACGAT GGCAGGGCTG GAAGTGGATG GCGTTGAGCC GGTTGCTGGC
GCATTCAACG GTGTGGTTGT CGGTGAAGTG GTTGAATGTG GGCAACACCC AAATGCAGAC
AAACTGCGTG TAACGAAAGT CAATGTAGGC GGCGATCGCC TGCTGGACAT CGTGTGCGGC
GCGCCGAACT GTCGTCAGGG GCTGAAAGTA GCGGTGGCGA CGGTAGGTGC CGTATTGCCG
GGCGATTTCA AAATCAAAGC CGCCAAACTG CGTGGCGAGC CGTCTGAAGG CATGCTGTGC
TCATTTTCCG AATTGGGCAT TTCCGACGAT CACGACGGCA TCATCGAACT GCCAGCCGAT
GCGCCAATTG GTACGGATAT TCGTGACTAC CTGAAGCTGG ATGACAACGC GATTGAAATC
AGCGTGACGC CAAACCGCGC AGATTGCCTC GGCATCATCG GCGTGGCACG TGACGTAGCT
GTGTTGAACC AACTGGCGTT GAATGCACCG GCTATTGAAC CCGTTGCTGC AACCATTCAG
GATACTTTCC CGATTCAGGT CGATGCGCCG CAGGCATGCC CGCGTTATTT AGGCCGTGTG
GTGAAAGGCA TCAATGTTAA GGCGGCAACG CCGCTGTGGA TGCGTGAAAA GCTGCGCCGC
TGTGGTATTC GTTCTATCGA TCCGGTGGTG GACGTGACGA ACTACGTTCT GCTGGAGCTA
GGCCAGCCGA TGCACGCATT CGATCTCGAC CGCCTCAATG GCGGCATCAT CGTGCGTATG
GCGAAAGAGG GCGAAACGCT GACGCTGCTG GATGGCAACG AAGCGAAGCT GAATGCAGAT
ACGCTGGTTA TCGCTGACCA GCAGAGCGCG CTGGCAATGG GCGGTATCTT TGGCGGCGAG
CATTCTGGCG TCAATGAAGC CACGCAGAAC GTTCTGCTGG AATGTGCCTA TTTTAATCCG
CTGTCAATTA CCGGGCGCGC ACGTCGCCAC GGCTTGCACA CCGATGCTTC CCACCGCTAC
GAGCGTGGCG TCGATCCGGC GTTACAACAC AACGCTATTG AGCGCGCGAC TCGCCTGCTG
ATCGATATCT GTGGTGGCGA AGCGGGGCCG GTTGTTGATG TAACCAGTAC GGCAGACCTG
CCGACGCGCG CAACGATTAC GCTGCGCCGT GAGAAGCTGG ATCGTTTGAT TGGACATGTG
ATTGCCGATG AGCAGGTTAG CGATATTCTG CAACGTCTGG GCTGTAATGT GACGAGAACC
GACGCAGGCT GGCAGGCGAC GGCTCCGAGC TGGCGTTTCG ACATGGAAAT TGAAGAGGAT
CTGGTTGAAG AAGTCGCGCG TATTTACGGC TACAACAACA TTCCGAATAT TCCTACTCAG
GCTCCGTTGA TCATGACCTC GCATCGCGAA GCGTCACTGT CATTGAAGCG TGTGAAGACA
TTATTAGTCG ACCACGGCTA CCAGGAAGCA ATTACTTACA GTTTTGTTGA CCCGAAAATT
CAGGGATTAA TCCACCCTGA TGAAGCGTCA TTAAGCCTGC CGAGCCCGAT TTCTGCAGAA
ATGTCGGTGA TGCGTCTGTC GCTGTGGAGC GGCCTGCTGA GTGCGGCGGT GTATAACCAA
AACCGTCAGC AAAGCCGTCT GCGTTTGTTT GAGAGCGGCC TGCGTTTTGT CCCAGACAGC
AGTGCCGATC TGGGTATTCG TCAGGATCTG ATGCTGGCGG GTGTGATTAC CGGTACGCGC
TATGAAGAAC ATTGGGATCT GGCGCGTCAG GCTGTTGACT TCTATGATTT AAAAGGCGAT
TTGGAAGCTG TACTGGCATT GACGGGCAAA TTGTCTGAAA TCGAATTCAA GGCCGAAAAC
AATCCGGCAT TGCATCCGGG ACAAAGTGCT GCTATTTATC TGGGCGAAGA ACGTATTGGA
TTTATTGGCG TTATTCACCC AGAACTGGAG CGCAAGTTGG ATCTCAACGG GCGCACCGTG
GTGTTCGAAC TGTTGTGGGA TAAGGTCGCA GACCGCGTAT TGCCTGAGGC GAACGAGGTT
TCCCGCTTCC CAGCGAACCG TCGTGATATT GCCGTTGTGG TCGCTGAAAA TGTCCCCGCG
GGAGACATTT TGGCCGAGTG TAAGAAAGTT GGCGCAAATC AGTTAGTTGG CGTAAACTTA
TTCGACGTGT ACCGAGGGAA GGGCGTAGCG GAAGGTTATA AGAGTCTGGC TATCAGTCTG
ACCCTGCAAG ATACCACGCG TACACTGGCA GAAGAGGAAA TTGCTGCTAC CGTTGCAGAA
TGCGTAGCAG CATTAAAACA GCGATTCCAA GCATCCTTGA GGGATTGA
 
Protein sequence
MKFSELWLRE WVNPAVDSET LSEQITMAGL EVDGVEPVAG AFNGVVVGEV VECGQHPNAD 
KLRVTKVNVG GDRLLDIVCG APNCRQGLKV AVATVGAVLP GDFKIKAAKL RGEPSEGMLC
SFSELGISDD HDGIIELPAD APIGTDIRDY LKLDDNAIEI SVTPNRADCL GIIGVARDVA
VLNQLALNAP AIEPVAATIQ DTFPIQVDAP QACPRYLGRV VKGINVKAAT PLWMREKLRR
CGIRSIDPVV DVTNYVLLEL GQPMHAFDLD RLNGGIIVRM AKEGETLTLL DGNEAKLNAD
TLVIADQQSA LAMGGIFGGE HSGVNEATQN VLLECAYFNP LSITGRARRH GLHTDASHRY
ERGVDPALQH NAIERATRLL IDICGGEAGP VVDVTSTADL PTRATITLRR EKLDRLIGHV
IADEQVSDIL QRLGCNVTRT DAGWQATAPS WRFDMEIEED LVEEVARIYG YNNIPNIPTQ
APLIMTSHRE ASLSLKRVKT LLVDHGYQEA ITYSFVDPKI QGLIHPDEAS LSLPSPISAE
MSVMRLSLWS GLLSAAVYNQ NRQQSRLRLF ESGLRFVPDS SADLGIRQDL MLAGVITGTR
YEEHWDLARQ AVDFYDLKGD LEAVLALTGK LSEIEFKAEN NPALHPGQSA AIYLGEERIG
FIGVIHPELE RKLDLNGRTV VFELLWDKVA DRVLPEANEV SRFPANRRDI AVVVAENVPA
GDILAECKKV GANQLVGVNL FDVYRGKGVA EGYKSLAISL TLQDTTRTLA EEEIAATVAE
CVAALKQRFQ ASLRD