Gene PC1_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1873 
Symbol 
ID8132816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp2161737 
End bp2162843 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content51% 
IMG OID644865162 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003017450 
Protein GI253688260 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0689213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGA AAGCGAGAAA GCGGTGGCAA CGCCGTCCTG GAACCACCGG CGGTAAACGT 
CTCTGGAACG ATTGGCGCAA TGCTCTGACC TGGCGCAGAG CAATACAAAT TCTTCTGCTG 
GCAATCAACG TTTATATCGG TATCACCTTC TATTTTTGGG TTCGCTACTT TGAAACGGGT 
GGGACGAGCC TTTATATGCA GAGGCCGGGC GGCATCGAAG GCTGGCTGCC CATTGCTGGA 
TTGATGAACG CTAAGTTCAC ATGGGAAACG GGCCATTTCC CCCCTATCCA CCTTGCGTCA 
ATGCTATTAC TTGTTGCGTT TATTCTTATT AGCCTGTTGC TGAAAAAATC CTTCTGTTCC 
TGGCTGTGTC CTATCGGCAC GATTTCCGAA TGGGTAGGTG CATTGGGGAA AAAAATAGTT 
GGCCGTCACT TCATTCTTCC GAAGTGGCTG GATATTCCGC TGCGCAGCCT GAAATATCTG 
TTACTAGGCT TTTTCCTTTA TATCGCCTTA TCGATGCCGG CACAGAGCAT TTATATGTTC 
CTGATGTCAC CCTATGGCCT GATCGCCGAC GTTAAAATGC TCGGCTTCTT CCGCAATATC 
GGTACTATCA CGCTGGTTTG CGTTTTTCTC TTCACGTTTG CCAGCCTGTT TGTCCGTCAT 
TTCTGGTGTC GCTACCTCTG TCCCTACGGT GCGCTCATGG GAATATTTTC GCTGCTGTCC 
CCCTTCAAAA TTCGCCGCAA CGCCACCAGT TGTATCGACT GCGGTAAGTG CGCCAGAGCC 
TGCCCGTCTA ACATTTCGGT GGATAAGCTA ATTCAGGTGA GAACGGCGGA ATGCACGGCC 
TGCATGACCT GCGTCGAATC CTGCCCGGTG GCATCAACGC TCCATTTTTC GCTTACAAAA 
CCCTTAGGTT CGCAGGCAGA CAGCGAAGCA ACTAAACCAC TATGGCGACA AACCGCGCTG 
TCCGGTATTA CGATGACGGT GCTGGTACTC GGTATTCTTT TCGGCATGAT CGGTTTTGCG 
ATGTACAGCG GCGGCTGGGA CAGTCCGATT CCCGAGCACA TGTATTTCCG GCTCATTCCC 
GGCTCACAGA GCATTGGTCA TCCATAA
 
Protein sequence
MSEKARKRWQ RRPGTTGGKR LWNDWRNALT WRRAIQILLL AINVYIGITF YFWVRYFETG 
GTSLYMQRPG GIEGWLPIAG LMNAKFTWET GHFPPIHLAS MLLLVAFILI SLLLKKSFCS 
WLCPIGTISE WVGALGKKIV GRHFILPKWL DIPLRSLKYL LLGFFLYIAL SMPAQSIYMF 
LMSPYGLIAD VKMLGFFRNI GTITLVCVFL FTFASLFVRH FWCRYLCPYG ALMGIFSLLS 
PFKIRRNATS CIDCGKCARA CPSNISVDKL IQVRTAECTA CMTCVESCPV ASTLHFSLTK 
PLGSQADSEA TKPLWRQTAL SGITMTVLVL GILFGMIGFA MYSGGWDSPI PEHMYFRLIP 
GSQSIGHP