Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1826 |
Symbol | znuC |
ID | 8132769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2111510 |
End bp | 2112268 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644865115 |
Product | high-affinity zinc transporter ATPase |
Protein accession | YP_003017403 |
Protein GI | 253688213 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.11011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACAT TGGTATCACT CAATAATATT TCAGTTACAT TTGGCAGCCG GAAGGTCTTG TCAGATATTT CTCTTACCTT GCAGGCAGGT CGAATTCTGA CGCTGCTGGG GCCGAATGGC GCAGGGAAAT CAACGTTAGT GCGCGTAGTT CTGGGGCTAC TTTCCCCGAC TTCCGGCTCG CTGGTCCGCG ATCCCGCGCT GCGTATCGGC TACGTTCCAC AGAAGTTGCA TCTGGATACC ACGCTGCCGT TGACCGTCAG CCGCTTTATG CAACTGCGTC CCGGCGTGAA AAAGCAGGAT ATTTTACCTG CACTTAAGCG TGTTCAGGCG GCACACCTGC TGGAACAACC GATGCAGAAA CTCTCAGGCG GCGAAACCCA GCGCGTACTG TTAGCACGCG CACTGCTCAA CCAGCCTCAA CTCCTGGTTC TTGATGAGCC GACACAGGGT GTCGACGTCA ACGGACAGAT GGCGCTGTAC GATCTCATCA ACCAGCTGCG GCAGGAATTC CACTGCGGCG TGTTAATGGT TTCGCACGAT CTGCATTTGG TGATGGCGAA AACCGATGAA GTCCTGTGCC TTAATCAACA TGTTTGTTGT TCCGGCACGC CTGAGGTCGT TTCCCTTCAC CCAGAATTCT TAGCGATGTT TGGCCACCGC GGCGCGGAGC AATTGGCGAT TTATCGCCAC CATCATAATC ATCGTCACGA TCTACAGGGA CGTATCATTC TGAAAAGACA AGGCGGAAAC GACGCATGA
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Protein sequence | MSTLVSLNNI SVTFGSRKVL SDISLTLQAG RILTLLGPNG AGKSTLVRVV LGLLSPTSGS LVRDPALRIG YVPQKLHLDT TLPLTVSRFM QLRPGVKKQD ILPALKRVQA AHLLEQPMQK LSGGETQRVL LARALLNQPQ LLVLDEPTQG VDVNGQMALY DLINQLRQEF HCGVLMVSHD LHLVMAKTDE VLCLNQHVCC SGTPEVVSLH PEFLAMFGHR GAEQLAIYRH HHNHRHDLQG RIILKRQGGN DA
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