| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1817 |
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| Symbol | |
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| ID | 8132760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2102737 |
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| End bp | 2103480 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644865106 |
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| Product | hypothetical protein |
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| Protein accession | YP_003017394 |
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| Protein GI | 253688204 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.670174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGGTC ATAGTAAGTG GGCTAACACA AAGCATCGTA AAGCAGCACA GGACGCCAAA
CGCGGTAAAA TCTTTACCAA GATTATCCGC GAACTGGTTA CCGCAGCCCG TCTGGGCGGT
GGCGATCCCG GTTCTAACCC GCGTCTGCGC GCAGCGATCG ATAAAGCACT GTCCAACAAC
ATGACGCGCG ATACCCTGAA CCGCGCGATT GCCCGTGGCG TCGGCGGTGA CGAAGATGCC
AACATGGAAA CCATCATTTA TGAAGGCTAC GGCCCGGGCG GCACTGCTGT CATGGTGGAG
TGCCTGAGTG ACAACCGTAA CCGTACCGTT TCCGAAGTGC GTCACGCGTT CACGAAGACG
GGTGGGAATC TGGGGACTGA TGGTTCCGTT TCATACCTTT TCACCAAGAA AGGCGTTATT
TCTTACGCAC CAGGTCTGGA TGAAGATGCA GTGATGGATG CGGCGTTAGA AGCAGGTGCT
GATGATGTCG TGACGTATGA CGACGGTGCG ATTGACGTCT TCACGCCGTG GGAAACGTTC
GGTAACGTGA AAGATGCGTT GGATGCGGCG GGCCTGAAAG CCGAGTCTGC TGAAGTGTCG
ATGATTCCAT CCACCAAGGC AGATATGGAT GCGGAAACAG CACCGAAACT GATGCGTCTG
ATTGACATGC TGGAAGACTG CGACGATGTG CAGGAGGTTT ACCATAACGG TGAAATCTCC
GATGAGGTGG CTGAACTGCT GTAA
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| Protein sequence | MAGHSKWANT KHRKAAQDAK RGKIFTKIIR ELVTAARLGG GDPGSNPRLR AAIDKALSNN
MTRDTLNRAI ARGVGGDEDA NMETIIYEGY GPGGTAVMVE CLSDNRNRTV SEVRHAFTKT
GGNLGTDGSV SYLFTKKGVI SYAPGLDEDA VMDAALEAGA DDVVTYDDGA IDVFTPWETF
GNVKDALDAA GLKAESAEVS MIPSTKADMD AETAPKLMRL IDMLEDCDDV QEVYHNGEIS
DEVAELL
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