Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1804 |
Symbol | |
ID | 8132747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2087643 |
End bp | 2088278 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644865093 |
Product | hypothetical protein |
Protein accession | YP_003017381 |
Protein GI | 253688191 |
COG category | [S] Function unknown |
COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.817852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATACC AACTAGATAC TCGTGAAGCT CGCGTGATTG GCTGCATGTT GGAAAAGCAG ATCACGACCC CGGATCAATA CCCGATGTCG TTAAACGGCA TCACCACGGC CTGTAATCAG AAAACTAACC GTGAACCCGT GATGGAACTG AGTGAAAGCG AAGTGCAGCA AACGCTGGAT TTACTCGTGA AGAAGCATTT TCTGCGCACG CTTAGCGGTT TTGGCAATCG TGTCGTGAAG TATGAACATC GTTTTTGCAA CTCTGAATTT GGCGACCTGA AACTCTCACC GGCGGAAGTC GCACTGGTGA CGACGCTTCT CCTGCGTGGG CCACAGACGC CAGGTGAACT GCGCACTCGC GCGGCCCGGC TGTATGAGTT TTCAGATGTT AGCGAGGCGG AATCCACGCT TGAACAGTTG CAACAACGCG ATGATGGCCC GTTTGTCGTT CGGCTGGCGC GGGAAGCGGG TAAGCGGGAA AGTCGTTATC GGCACCTTTT CAGCGGCGAC GCCAGTGATG CTGCTCCTGA AGAAGAAGGG GCGGGCGACA ATTCACATCA GTTGACTGAG CGGGTTGAGA CGTTAGAAAA AGAGGTCGCG GAACTCAAAC GTCAGCTTGC CGCGCTGTTA GCGTAA
|
Protein sequence | MKYQLDTREA RVIGCMLEKQ ITTPDQYPMS LNGITTACNQ KTNREPVMEL SESEVQQTLD LLVKKHFLRT LSGFGNRVVK YEHRFCNSEF GDLKLSPAEV ALVTTLLLRG PQTPGELRTR AARLYEFSDV SEAESTLEQL QQRDDGPFVV RLAREAGKRE SRYRHLFSGD ASDAAPEEEG AGDNSHQLTE RVETLEKEVA ELKRQLAALL A
|
| |