Gene PC1_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1792 
Symbol 
ID8132734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp2073747 
End bp2075675 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content54% 
IMG OID644865080 
ProductABC transporter ATPase component 
Protein accessionYP_003017369 
Protein GI253688179 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTAA TCAGTGTTTC AGGTGCATGG CTGTCGTTCA GCGATGCGCC GCTGTTGGAT 
AACACCGAAC TCCATATCGA AGAGAATGAG CGCGTTTGTC TGGTTGGACG TAACGGCGCG
GGTAAATCAA CCCTGCTAAA AATTCTGGCC AAAGAAATCC CGCTGGATGA TGGTCGTATT
ACCTATGAGC AGGATCTGAT TGTTGCGCGT TTACAACAGG ATCCTCCGCG TGATGTTGCT
GGTAGCGTCT TTGACTTTGT CGCCGAAGGG GTGGCCGCGC AGGCGGGTTA CCTGAAAGAT
TACCATGCCA TGCTGCGCCT GGTAGAGAGC GACCCGAGCG AAAAGAACCT GAATCAGCTG
GCTAAGTTGC AGGATGTTCT GGAGCATCAG GGCCTGTGGC AACTGGAAAG TCGCATTCAC
GAAGTGCTGG AACAGCTTGG TTTGTCAGCC GATGCGCCAC TGGCGTCGCT TTCAGGCGGC
TGGCTGCGTA AAGCTGCGCT GGGCAGAGCG TTGGTGAGTT CACCGCGAGT TCTGCTGCTG
GATGAACCAA CCAACCATCT GGACATCGAG ACGATTGACT GGCTGGAGAC GTTCCTGAAA
ACGTTTCAGG GCAGCATTAT CTTTATCTCC CATGACCGTT CGTTTATTCG CAACATGGCA
ACCCGCATTG TCGATCTTGA TCGCGGCAAA CTGGTTTCCT GGCCGGGCAA CTACGATAAA
TATCTGGAAG GAAAAGAAGA AGCGTTGCGA GTAGAAGATC TGCAAAATGC GGAGTTCGAT
CGCAAGCTGG CACAGGAAGA AGTGTGGATC CGTCAGGGCA TCAAAGCCCG TCGTACCCGC
AACGAAGGCC GTGTACGTGC GCTGAAGGCT ATGCGTCAGG AACGAGCTCA GCGCCGTGAA
GTGATGGGCT CGGCGAAAAT GCAGGTTGAA GAAGCCGCCC GCTCCGGCAA GATTGTGTTT
GAGCTGGAAG ACGTGAACTA TCTGGTTGAT CAGGGCCCTC AAGGCGAAAG GAAAGTCCTG
GCGCGCAATT TCTCCGCTCA GGTACAGCGT GGCGACAAAA TTGCGCTGGT GGGGCCGAAT
GGCTGCGGTA AAACCACGCT GCTAAAATTG ATGCTGGGTG ACCTGGAACC GATCAGCGGC
CGCGTACATT GCGGGACGAA GCTGGAAGTT GCCTATTTCG ATCAGCACCG TGCCGAACTC
GATCCAGAAC GTACGGTGAT GGACAATCTG GCGGAAGGTA AACAGGAAGT GATGGTCAAC
GGCCGTTCAC GCCATGTGTT AGGCTATTTG CAGGACTTCT TGTTCCATCC CAAACGCGCG
ATGACGCCAG TAAAAGCGCT GTCGGGTGGG GAACGTAACC GCCTGTTGCT CGCGCGTTTG
TTCCTCAAAC CTAGCAACTT GTTGATTCTT GATGAACCGA CCAACGATCT GGACGTGGAA
ACGCTGGAAT TGCTGGAAGA GTTAATTGAA AGTTATCAGG GAACCGTTCT GCTGGTCAGC
CACGATCGTC AGTTTGTTGA TAATTCGGTT ACCGAATGCT GGATCTTTGA AGGTGAAGGC
AAGATTTCCC GCTTCGTCGG TGGGTATTAC GATGCACAGC AGCAGCGTGC AACGGCAACG
CCATTGAGAA CGACGAGTGC GCCAGCGGCA ACTACGTCAG CGACGGCCGC GAGCACCGCA
CCGTCCGCTA AACGCAGCGC GGGGAAATTA AGTTATAACC AGCAGCGCGA ATTAGAGCAG
TTGCCGCAAC GCCTTGAGCA ACTGGAACAG GACATTGCGT CGCTGCAGGC GCAGATGAAT
GATACGGGTT TCTTTAGCCG CCCACGCGAA GAGACGCAGC AGGTGTTAAA TGCTCTGGCG
GAAGCGGAAA GCGCGTTGGA AGCCTGTTTC GAACGTTGGG AAGAGTTGGA AGCACAGAAA
AACGGCTAA
 
Protein sequence
MSLISVSGAW LSFSDAPLLD NTELHIEENE RVCLVGRNGA GKSTLLKILA KEIPLDDGRI 
TYEQDLIVAR LQQDPPRDVA GSVFDFVAEG VAAQAGYLKD YHAMLRLVES DPSEKNLNQL
AKLQDVLEHQ GLWQLESRIH EVLEQLGLSA DAPLASLSGG WLRKAALGRA LVSSPRVLLL
DEPTNHLDIE TIDWLETFLK TFQGSIIFIS HDRSFIRNMA TRIVDLDRGK LVSWPGNYDK
YLEGKEEALR VEDLQNAEFD RKLAQEEVWI RQGIKARRTR NEGRVRALKA MRQERAQRRE
VMGSAKMQVE EAARSGKIVF ELEDVNYLVD QGPQGERKVL ARNFSAQVQR GDKIALVGPN
GCGKTTLLKL MLGDLEPISG RVHCGTKLEV AYFDQHRAEL DPERTVMDNL AEGKQEVMVN
GRSRHVLGYL QDFLFHPKRA MTPVKALSGG ERNRLLLARL FLKPSNLLIL DEPTNDLDVE
TLELLEELIE SYQGTVLLVS HDRQFVDNSV TECWIFEGEG KISRFVGGYY DAQQQRATAT
PLRTTSAPAA TTSATAASTA PSAKRSAGKL SYNQQRELEQ LPQRLEQLEQ DIASLQAQMN
DTGFFSRPRE ETQQVLNALA EAESALEACF ERWEELEAQK NG