Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1792 |
Symbol | |
ID | 8132734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2073747 |
End bp | 2075675 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644865080 |
Product | ABC transporter ATPase component |
Protein accession | YP_003017369 |
Protein GI | 253688179 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTAA TCAGTGTTTC AGGTGCATGG CTGTCGTTCA GCGATGCGCC GCTGTTGGAT AACACCGAAC TCCATATCGA AGAGAATGAG CGCGTTTGTC TGGTTGGACG TAACGGCGCG GGTAAATCAA CCCTGCTAAA AATTCTGGCC AAAGAAATCC CGCTGGATGA TGGTCGTATT ACCTATGAGC AGGATCTGAT TGTTGCGCGT TTACAACAGG ATCCTCCGCG TGATGTTGCT GGTAGCGTCT TTGACTTTGT CGCCGAAGGG GTGGCCGCGC AGGCGGGTTA CCTGAAAGAT TACCATGCCA TGCTGCGCCT GGTAGAGAGC GACCCGAGCG AAAAGAACCT GAATCAGCTG GCTAAGTTGC AGGATGTTCT GGAGCATCAG GGCCTGTGGC AACTGGAAAG TCGCATTCAC GAAGTGCTGG AACAGCTTGG TTTGTCAGCC GATGCGCCAC TGGCGTCGCT TTCAGGCGGC TGGCTGCGTA AAGCTGCGCT GGGCAGAGCG TTGGTGAGTT CACCGCGAGT TCTGCTGCTG GATGAACCAA CCAACCATCT GGACATCGAG ACGATTGACT GGCTGGAGAC GTTCCTGAAA ACGTTTCAGG GCAGCATTAT CTTTATCTCC CATGACCGTT CGTTTATTCG CAACATGGCA ACCCGCATTG TCGATCTTGA TCGCGGCAAA CTGGTTTCCT GGCCGGGCAA CTACGATAAA TATCTGGAAG GAAAAGAAGA AGCGTTGCGA GTAGAAGATC TGCAAAATGC GGAGTTCGAT CGCAAGCTGG CACAGGAAGA AGTGTGGATC CGTCAGGGCA TCAAAGCCCG TCGTACCCGC AACGAAGGCC GTGTACGTGC GCTGAAGGCT ATGCGTCAGG AACGAGCTCA GCGCCGTGAA GTGATGGGCT CGGCGAAAAT GCAGGTTGAA GAAGCCGCCC GCTCCGGCAA GATTGTGTTT GAGCTGGAAG ACGTGAACTA TCTGGTTGAT CAGGGCCCTC AAGGCGAAAG GAAAGTCCTG GCGCGCAATT TCTCCGCTCA GGTACAGCGT GGCGACAAAA TTGCGCTGGT GGGGCCGAAT GGCTGCGGTA AAACCACGCT GCTAAAATTG ATGCTGGGTG ACCTGGAACC GATCAGCGGC CGCGTACATT GCGGGACGAA GCTGGAAGTT GCCTATTTCG ATCAGCACCG TGCCGAACTC GATCCAGAAC GTACGGTGAT GGACAATCTG GCGGAAGGTA AACAGGAAGT GATGGTCAAC GGCCGTTCAC GCCATGTGTT AGGCTATTTG CAGGACTTCT TGTTCCATCC CAAACGCGCG ATGACGCCAG TAAAAGCGCT GTCGGGTGGG GAACGTAACC GCCTGTTGCT CGCGCGTTTG TTCCTCAAAC CTAGCAACTT GTTGATTCTT GATGAACCGA CCAACGATCT GGACGTGGAA ACGCTGGAAT TGCTGGAAGA GTTAATTGAA AGTTATCAGG GAACCGTTCT GCTGGTCAGC CACGATCGTC AGTTTGTTGA TAATTCGGTT ACCGAATGCT GGATCTTTGA AGGTGAAGGC AAGATTTCCC GCTTCGTCGG TGGGTATTAC GATGCACAGC AGCAGCGTGC AACGGCAACG CCATTGAGAA CGACGAGTGC GCCAGCGGCA ACTACGTCAG CGACGGCCGC GAGCACCGCA CCGTCCGCTA AACGCAGCGC GGGGAAATTA AGTTATAACC AGCAGCGCGA ATTAGAGCAG TTGCCGCAAC GCCTTGAGCA ACTGGAACAG GACATTGCGT CGCTGCAGGC GCAGATGAAT GATACGGGTT TCTTTAGCCG CCCACGCGAA GAGACGCAGC AGGTGTTAAA TGCTCTGGCG GAAGCGGAAA GCGCGTTGGA AGCCTGTTTC GAACGTTGGG AAGAGTTGGA AGCACAGAAA AACGGCTAA
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Protein sequence | MSLISVSGAW LSFSDAPLLD NTELHIEENE RVCLVGRNGA GKSTLLKILA KEIPLDDGRI TYEQDLIVAR LQQDPPRDVA GSVFDFVAEG VAAQAGYLKD YHAMLRLVES DPSEKNLNQL AKLQDVLEHQ GLWQLESRIH EVLEQLGLSA DAPLASLSGG WLRKAALGRA LVSSPRVLLL DEPTNHLDIE TIDWLETFLK TFQGSIIFIS HDRSFIRNMA TRIVDLDRGK LVSWPGNYDK YLEGKEEALR VEDLQNAEFD RKLAQEEVWI RQGIKARRTR NEGRVRALKA MRQERAQRRE VMGSAKMQVE EAARSGKIVF ELEDVNYLVD QGPQGERKVL ARNFSAQVQR GDKIALVGPN GCGKTTLLKL MLGDLEPISG RVHCGTKLEV AYFDQHRAEL DPERTVMDNL AEGKQEVMVN GRSRHVLGYL QDFLFHPKRA MTPVKALSGG ERNRLLLARL FLKPSNLLIL DEPTNDLDVE TLELLEELIE SYQGTVLLVS HDRQFVDNSV TECWIFEGEG KISRFVGGYY DAQQQRATAT PLRTTSAPAA TTSATAASTA PSAKRSAGKL SYNQQRELEQ LPQRLEQLEQ DIASLQAQMN DTGFFSRPRE ETQQVLNALA EAESALEACF ERWEELEAQK NG
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