Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1791 |
Symbol | rlmL |
ID | 8132733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2071626 |
End bp | 2073743 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644865079 |
Product | 23S rRNA m(2)G2445 methyltransferase |
Protein accession | YP_003017368 |
Protein GI | 253688178 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCTT TGTTTGCCAG CACGGCGCGG GGACTGGAAG AGTTATTGAA AAGCGAACTC GAATCATTGG GCGCGCAGTC CTGTACGGTG GTGCAGGGTG GTGTCCATTT TGAGGGTGAC AACAGCCTGC TGTACCGGAG CCTGCTGTGG AGCCGTCTGG CATCGCGCAT TCTGCTGCCG CTGAATGAAT TCAAGGTACA TAGCGATCTG GATTTGTATC TGGGCGTGCA GGCGATTGAC TGGTCAACGG TCTTCAGCAT CGATAAAACC TTTGCCGTGC ATTTTACCGG CACGAATGAA GATATCCGCA ACAGTCAGTA CGGTGCGTTA AAAGTTAAAG ATGCGATTGT TGATAGCTTC ACGCGCAAAA CCGGACAGCG TCCGGACGTA GCGAAACAGC AGCCGGATAT TCGCGTTAAC GTCTTTTTAC AGCGTGACAC GGCCAGCGTG TCGCTGGATT TAAGCGGCGA GGGCTTGCAC CAGCGCGGTT ACCGCGATCT GGCGGGGCTG GCGCCGCTAA AAGAAAACCT GGCCGCGGCG ATTGTATTAC GTTCCGGTTG GCAAAACGGT ACGCCACTGG TCGATCCGAT GTGTGGTTCC GGTACGTTGC TGATCGAAGC GGCGATGATC GCCGCCGATC GCGCGCCCGG TTTGCATCGT ACGCACTGGG GATTTAACGC CTGGTTAAAA CACGATGCCG ACCTGTGGCG CGAAGTGACG GCGGAAGCAC AGCTGCGCGC CCGTCAAGGG TTGCAGGCAA CCACGTCACG CTTCTTCGGA TCGGATAATG ACCGTCGGGT GATTGACATC GCCAAAGCCA ATGCGCGTCG TGCAGGCGTG GCCGAATTGA TTTCTTTCGG CGTCAAAGAT GCGGCACAGC TGCAAAACCC GCTGCCGGAA GGTCCGAAAG GGACGGTCAT CAGCAACCCG CCTTACGGTG AGCGTCTGGA AAGTGAGCCT GCATTGATCG CTCTGCATAA TATGCTGGGT CGTAAGATGA AAAGCGACTT TGGCGGCTGG CAGCTCTCGC TGTTCAGCGC GTCGCCGGAG CTGTTGAGCT GTCTGCAACT GCGTGCTGAA CGCCAATTCA AAGCGAAAAA CGGTCCGCTG GACTGCGTAC AGAAAAATTA TCAACTGGCA GAAACGCAGA GCGAATCCGC AGGACAGATC GCGGAAGACT TTGCCAACCG CCTGCGTAAG AACCTGCGTA AGCTGGATAA ATGGGCGAAG CAGCAGGGGA TTGAATGCTA TCGCCTCTAT GATGCCGATC TGCCTGAATA TAATGTAGCG GTCGATCGCT ACGGCAGTTG GGTAGTCGTA CAAGAGTATG CGCCACCGAA AACTGTCGAT GCCCAGAAAG CCCGTCAACG CCTGTTTGAT GTGATTAACG CGACGTTGAG CGTGCTGGAA TTACCGTCGA ACCGTCTGGT GCTGAAAACA CGTGAACGCC AGAAAGGCAA AAACCAGTAT GAAAAACTGG CACAGAAAGG CGACTTCCTT TTGATGGAAG AGTTTGGCGC CAAGCTGTGG GTCAATCTGA CTGACTACCT GGATACCGGT TTGTTCCTCG ACCACCGTAT CGCCCGCAAA ATGCTGGGTG AGATGAGCCG TGGCAAAGAT TTTCTCAACC TGTTTGCCTA CACCGGCACG GCAAGTGTGC ACGCCGGATT GGGTGGCGCA CGTTCAACGA CCACCGTTGA TATGTCACGT ACCTATCTGG AATGGGCGGA GAAAAACCTG CGGGTGAATG GCCTGACCGG ACGTCAGCAC CGTTTGATTC AAGCGGATTG TCTGTCGTGG CTGCATAACG CCAATGAACA GTTTGATGTC ATTTTCATCG ATCCGCCGAC CTTCTCTAAC TCAAAACGGA TGGAAGAATC GTTTGATGTC CAGCGCGATC ATCTGGCGTT GATGAAAGAT CTCAAACGTC TGCTGCGTCG TGGCGGCACC ATCATGTTCT CGAATAATAA ACGCGGTTTC CAGATGGATA GCACTGGCCT GACCGCGCTC GGGCTGAATG CCAAAGAAAT TACCGCGCAG ACCCAATCGC AAGATTTTGC TCGTAATCGT CAGATTCATA ACTGCTGGCT GCTAACGCAT GCTGGTGAGG AAAAGTAA
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Protein sequence | MNALFASTAR GLEELLKSEL ESLGAQSCTV VQGGVHFEGD NSLLYRSLLW SRLASRILLP LNEFKVHSDL DLYLGVQAID WSTVFSIDKT FAVHFTGTNE DIRNSQYGAL KVKDAIVDSF TRKTGQRPDV AKQQPDIRVN VFLQRDTASV SLDLSGEGLH QRGYRDLAGL APLKENLAAA IVLRSGWQNG TPLVDPMCGS GTLLIEAAMI AADRAPGLHR THWGFNAWLK HDADLWREVT AEAQLRARQG LQATTSRFFG SDNDRRVIDI AKANARRAGV AELISFGVKD AAQLQNPLPE GPKGTVISNP PYGERLESEP ALIALHNMLG RKMKSDFGGW QLSLFSASPE LLSCLQLRAE RQFKAKNGPL DCVQKNYQLA ETQSESAGQI AEDFANRLRK NLRKLDKWAK QQGIECYRLY DADLPEYNVA VDRYGSWVVV QEYAPPKTVD AQKARQRLFD VINATLSVLE LPSNRLVLKT RERQKGKNQY EKLAQKGDFL LMEEFGAKLW VNLTDYLDTG LFLDHRIARK MLGEMSRGKD FLNLFAYTGT ASVHAGLGGA RSTTTVDMSR TYLEWAEKNL RVNGLTGRQH RLIQADCLSW LHNANEQFDV IFIDPPTFSN SKRMEESFDV QRDHLALMKD LKRLLRRGGT IMFSNNKRGF QMDSTGLTAL GLNAKEITAQ TQSQDFARNR QIHNCWLLTH AGEEK
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