Gene PC1_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1789 
Symbol 
ID8132731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2069770 
End bp2070357 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content48% 
IMG OID644865077 
Producthypothetical protein 
Protein accessionYP_003017366 
Protein GI253688176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.139649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAA AACCTGACGA TAACTGGCGC TGGTATTTTG ATACCGAACA CGACCGCCTG 
ATGTTGGATT TGGCTAATGG CATGTTATTC CGTTCTCGTT TTCCCTCTAA AATGTTAACG 
CCGGATGCTT TCAATGAATG TGCCTTTTGC GTTGACGACG CCGCGTTATT TTTTACGTAT 
AACGACAAAT GTCAGAAAGC AGCGCTGCAT CGCGATCTTC AAGGCGAATT AGTTTTAAAC 
GCGCTGGTGG CCACTCGATT CCTCAAGCCA TTAATGCCGA AAAGCTGGCA TTTCATCCAA 
CAGCAGGATG CCGCGACCTA TTCACCGCAG GCGGGTGACG TTGTGCAGGT GCAACTCACC 
GAAACCCATG AAACGGCTTG TTTTCTGGTG GCGGAAGCGG GAGATAAAGC CTGTCTCTGT 
CTGTTAGCGC AAGAACAACT GTCATTAAGT GGGAAAACTA TGGTGCTGGG TGATGCCATA 
AAAATCATGC ACGACAGATT AATTCTGGCC GTGGTTCAGA ATAGGTCTGA GTGGGAAACC 
GGATTAGGCG AAGGCACATC GGCATTTGAG TATGCCAAGG TCGTCTAG
 
Protein sequence
MKLKPDDNWR WYFDTEHDRL MLDLANGMLF RSRFPSKMLT PDAFNECAFC VDDAALFFTY 
NDKCQKAALH RDLQGELVLN ALVATRFLKP LMPKSWHFIQ QQDAATYSPQ AGDVVQVQLT 
ETHETACFLV AEAGDKACLC LLAQEQLSLS GKTMVLGDAI KIMHDRLILA VVQNRSEWET 
GLGEGTSAFE YAKVV