Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1783 |
Symbol | |
ID | 8132725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 2059792 |
End bp | 2060982 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644865071 |
Product | aromatic amino acid aminotransferase |
Protein accession | YP_003017360 |
Protein GI | 253688170 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00163536 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAAA ATATCTCTGC CGCACCGGCC GATCCTATTC TCGGGCTGAC CGATCTTTTC CGCGCCGATG ACCGCGCGAA TAAAATCAAT CTGGGTATTG GTGTCTATAA AGATGAAACC GGTAAAACTC CGGTTCTGAC CAGCGTAAAA AAAGCAGAAC AGTATCTGCT GGAAAATGAA ACCACCAAAA ACTATCTGAG CATTGACGGT CTGCCAGCAT TCGGTCAGTG CACGCAGGAG CTATTGTTTG GCAAGCAGAA TGCCATCATT GCCGACAAAC GTGCCCGTAC GGCGCAAACC CCAGGCGGAA CGGGTGCATT GCGCGTAGCG GCGGATTTCA TTGCCAATCA GACATCTGCA AAGCGCATTT GGATCAGCAA CCCAACCTGG CCAAATCACA ATAACGTCTT CTCTGCCGTC GGTTTGGAAG TGTGCCAGTA TGACTACTAC GATGCAGCGA ACCATGCGCT GGATTTTGAT GGCTTGCTGA ACAGCCTGAA CGCAGCACAA GCGGGCGACG TGGTACTGTT CCACGGCTGT TGCCATAACC CAACCGGTAT CGATCCTACA GCTGAGCAGT GGGCTACGTT GGCTGAGCTG TCGATAGCGA AAGGCTGGCT GCCGCTGTTT GACTTCGCCT ATCAGGGCTT CGCCCGCGGC CTCGAAGAAG ATGCGGAAGG TCTGCGTATT TTCGCCGCGA AGCACGATGA ACTGATCGTA TGCAGTTCGT ACTCTAAAAA CTTCGGTTTG TACAATGAGC GTGTCGGTGC CTGCACGCTG GTTGCTGCCG ATGCCGCAAC GGCAGATAAA GCATTCAGTC AGGTGAAAGC GGCTATTCGC GCAAACTACT CTAACCCGCC GTCACACGGT GCGACCGTTG TGGCTACCAT TCTGGGCAAC GACGCGCTGA AAACCATTTG GGTGCAGGAA TTAACGGCGA TGCGTGAGCG CATTCAGCGT ATGCGTCAGC TGTTCGTTAA TACCTTGCAG GAAAAAGGCG CGCAGCAGGA TTTCTCCTTC ATCATCGACC AGAATGGGAT GTTCTCATTC AGTGGCCTGA CCAAAGAGCA GGTTCTGCGT CTGCGTGACG AATTCGGCGT TTATGCGGTG AATTCTGGCC GTATCAACGT TGCGGGAATG ACGCCGGAAA ATATGGCTCC GCTCTGCGAA GCGATTGTTG CCGTGCTCTA A
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Protein sequence | MFENISAAPA DPILGLTDLF RADDRANKIN LGIGVYKDET GKTPVLTSVK KAEQYLLENE TTKNYLSIDG LPAFGQCTQE LLFGKQNAII ADKRARTAQT PGGTGALRVA ADFIANQTSA KRIWISNPTW PNHNNVFSAV GLEVCQYDYY DAANHALDFD GLLNSLNAAQ AGDVVLFHGC CHNPTGIDPT AEQWATLAEL SIAKGWLPLF DFAYQGFARG LEEDAEGLRI FAAKHDELIV CSSYSKNFGL YNERVGACTL VAADAATADK AFSQVKAAIR ANYSNPPSHG ATVVATILGN DALKTIWVQE LTAMRERIQR MRQLFVNTLQ EKGAQQDFSF IIDQNGMFSF SGLTKEQVLR LRDEFGVYAV NSGRINVAGM TPENMAPLCE AIVAVL
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