Gene PC1_1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1782 
Symbol 
ID8132724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2059065 
End bp2059712 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content53% 
IMG OID644865070 
Productbeta-lactamase domain protein 
Protein accessionYP_003017359 
Protein GI253688169 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00356762 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATC AAATTGTCCC AGTGACAGCA TTTAGCCAGA ATTGTACGTT GTTATGGTGT 
GAAAAAACGA ATGAAGCGGC GATTGTCGAT CCCGGTGGCG ATGCAGAAAA AATCAAACGC 
GCCGTTGCGG ATGCAGGGAT TTCGGTTAAG CAGATTCTGT TAACACATGG TCATTTGGAT 
CACGTTGGTG CGGCAGCGGA ATTGGCCGAA CACTATCAGG TTGCGATTAT TGGCCCGCAG 
ATTGAAGATG CATTCTGGCT GGAAGGGCTA CCGGCACAGA GCCGGATGTT TGGCCTGGAA 
GAGTGCGCAC CGCTGACGCC ATCGCGTTGG CTACAGGAAG GTGATGAGGT CAGCCTGGGG 
GAAACCACGC TGGCGGTTTT CCACTGTCCT GGTCATACAC CCGGCCATAT CGTTTTCTTT 
GATGCAGAAT CGCGCCTGGC ACAGGTGGGT GATGTCATTT TCAACGGCGG TGTAGGGCGT 
ACCGATTTTC CACAGGGCGA TCATCAGGCG CTGATTGCAT CCATCAAGAA TAAGCTGCTG 
CCGCTGGGTG ACGATGTGAC GTTTATTCCA GGGCACGGCC CGATGTCAAC GTTAGGTTAT 
GAGCGCAGAA CGAACCCTTT CCTGCGTGAA GATGCCGCGA TTTGGTAG
 
Protein sequence
MKYQIVPVTA FSQNCTLLWC EKTNEAAIVD PGGDAEKIKR AVADAGISVK QILLTHGHLD 
HVGAAAELAE HYQVAIIGPQ IEDAFWLEGL PAQSRMFGLE ECAPLTPSRW LQEGDEVSLG 
ETTLAVFHCP GHTPGHIVFF DAESRLAQVG DVIFNGGVGR TDFPQGDHQA LIASIKNKLL 
PLGDDVTFIP GHGPMSTLGY ERRTNPFLRE DAAIW