| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1780 |
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| Symbol | |
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| ID | 8132722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2056525 |
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| End bp | 2058255 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865068 |
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| Product | hypothetical protein |
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| Protein accession | YP_003017357 |
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| Protein GI | 253688167 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0104141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTTGT TACATAAACG AAAAATGGTC AGGCTGCTGT TGCGCGTGGG TTGTATTTGG
GTCGGAAGCC TGTCTCCTTC GTTTTCGGTG CTGGCAGCAT CTCCGACGGT GATATCTGGC
TTATCGCAAA GCTCGGGTGC AGTTTCTGTA GAAAAGAGTC GTGCAGGGCT TCTTTCAGCG
CTGCCGCATG GCGTGTCGGT ACATTATCTC TCTGATTTAT CATCGCTTTA TGCCCAACAT
CAGATGCAAC CGATGTGGGC GGATAATCGC GCGGTGCAAC AGTTTCAACA GCAGCTTGCC
GAATTGGCGA TAGCGGGCGT ACAGCCGCAG TTCACCACGT GGGTGACTTG GCTTACCGAT
CCGCAATTGA CCGGGTTTGC GCGCGATGTC GTGCTATCGG ATGCAATGCT GGGCTATTTG
CAGTTTGTTT CTGGCGTGGA GCGTAACGGC AATGATTGGC TGTACAGCAG CGTACCTTAT
CGTCTGCAAT CGCCTGCGTT GAATATCGTT TCTCAATGGC AACAGGCCGT AAAATCCGGC
ACCAGTGCGG CCTATGTGGT TTCGCTGGCA CCGCAGCATT CACAGTACGC CAAAATGCAT
GAGGCGCTGA AGACGATGCT GACGGACAAT CGCCCGTGGC CGAGTCTGAA TTTGACGGAA
TCTCTACGTC CGGAACAGCA GAGCCGAGAG CTGGCAGTAC TGCGTGAAAT TCTACAGCGT
ACTGGCATGC TGTCGTCAAC GGAGAGCATT ACGCTGTTTA ACGAAAATAC CGCCGCGACG
ACGATACCGA CAGGCCAATC TCCGTTGGTC GAGAATGGTG CTGCGATCTA CACGGGTGAA
CTGGTTGAAG CGGTGAAACG CTTCCAGCAT TGGCAAGGGC TGGAAGATGA TGGCGTCATT
GGTAAGCGTA CTCGCGATTG GCTCAATGTG TCCCCACAAA TGCGCGCGAC GCTGCTGGCG
CTGAATATTC AACGTCTGCG CCTGCTACCG GATAATGTTC ACACCGGTAT TATGGTGAAT
ATCCCCAATT ATTCGCTGAT CTATTATCAG GACGGCGCTG AACGCTTATC GTCACGCGTT
ATTGTTGGAC AGCCCAAGCG TAAGACGCCG TTGATGAGTA GTTCGCTGTA TAACGTGGTG
GTCAATCCGC CGTGGAATGT CCCTACGACG CTGATTCGAC AGGATATCAT TCCTAAAGTA
GTACGCGATC CCGGTTATCT ACAGCGTCAT GGCTATACGG TGTTGTCCGG CTGGAGTCAG
GATGCGGAAG TGATTGATCC ATCGATGATC GATTGGCAGA TTGTGTCACC AGAGCGCTTC
CCCTATCGCT TACGTCAGGC TCCTGGCGCG AACAACTCGC TGGGGCGCTA TAAATTCAAT
ATGCCAAATT CGGAAGCGAT TTATCTGCAC GATACGCCCA ATCACAACTT GTTCCAGCGT
GATATCCGGG CGCTGAGTTC CGGCTGTGTG CGGGTCAATA AGGCATCGGA ATTGGCTAGC
ATGCTATTGC AGGATGCGGG ATGGAATAAT AGTCGAATTT CTTCCACGCT GGATCAGGGG
AACACGACCT TTGTTTCAAT GAAGCACCGG ATTCCGGTTA ATCTCTATTA CCTGACAGCG
TGGGTAGCGG AAGATGGCAG GCCTCAATTC CGCACAGATA TTTACAATTA TGATGATACT
GCCCGAGCCG GGACGAAAGT CCTCTCCAAA GCAGGGTTAT TGCTTCAGTA A
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| Protein sequence | MLLLHKRKMV RLLLRVGCIW VGSLSPSFSV LAASPTVISG LSQSSGAVSV EKSRAGLLSA
LPHGVSVHYL SDLSSLYAQH QMQPMWADNR AVQQFQQQLA ELAIAGVQPQ FTTWVTWLTD
PQLTGFARDV VLSDAMLGYL QFVSGVERNG NDWLYSSVPY RLQSPALNIV SQWQQAVKSG
TSAAYVVSLA PQHSQYAKMH EALKTMLTDN RPWPSLNLTE SLRPEQQSRE LAVLREILQR
TGMLSSTESI TLFNENTAAT TIPTGQSPLV ENGAAIYTGE LVEAVKRFQH WQGLEDDGVI
GKRTRDWLNV SPQMRATLLA LNIQRLRLLP DNVHTGIMVN IPNYSLIYYQ DGAERLSSRV
IVGQPKRKTP LMSSSLYNVV VNPPWNVPTT LIRQDIIPKV VRDPGYLQRH GYTVLSGWSQ
DAEVIDPSMI DWQIVSPERF PYRLRQAPGA NNSLGRYKFN MPNSEAIYLH DTPNHNLFQR
DIRALSSGCV RVNKASELAS MLLQDAGWNN SRISSTLDQG NTTFVSMKHR IPVNLYYLTA
WVAEDGRPQF RTDIYNYDDT ARAGTKVLSK AGLLLQ
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