Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1777 |
Symbol | |
ID | 8132719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 2049593 |
End bp | 2050918 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644865065 |
Product | condesin subunit F |
Protein accession | YP_003017354 |
Protein GI | 253688164 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG3006] Uncharacterized protein involved in chromosome partitioning |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.041681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATT TTTCCCAGAC TGTACCCGAA CTGGTCGCCT GGGCACGAAA AAATGATTTC TCCATTTCCC TCCCTACCGA ACGCCTGGCG TTTTTGATGG CGATCGCCAC GCTTAACGGC GAACGCATGG ATGGTGAAAT GAGTGAAGGT GAGCTGATTG ATGCCTTCCG CCATGTGAGT CAGGGATTTG ATCAGACGAA CGAAACCATT ACCGTCCGCG CCAATAACGC GATTAACGAT CTGGTGCGCC AGCGATTGCT TAACCGCTTT ACCAGCGAAC AGGCGGAAGG CAATGCGATT TATCGTCTGA CGCCGCTGGG GATTGGCATT ACCGATTATT ATATCCGGCA GCGTGAGTTC TCGACGCTGC GACTTTCCAT GCAGCTCTCT ATCGTGGCAC AGGAACTCAG CCGTGCTGCC GATGCAGCAG AAGAAGGCGG CGATGAGTTT CACTGGCATC GCAACGTGTT TGCGCCGCTG AAATATTCCG TTGCTGAAAT TTTTGACAGT ATCGATCTGT CACAGCGTGT GATGGATGAG CAGCAGCAGG GTGTGAAAGA CGATATCGCA GCGTTGTTAA ATCAGGACTG GCGGGCAGCG ATCAGCAGCT GTGAACAACT GCTGACGGAA ACGTCGTCTA CACTGCGTGA ATTGCAGGAT ACGCTGGAAG CTGCTGGCGA CAAGTTGCAG GCGAGCCTGT TGAGCATTCA GGATGCGATT ATGAATAATG CGCATAATCT GGAATTTGTC GACAAACTGG TCTTTGACCT GCAAAACAAA CTCGATCGCA TTGTGAGCTG GGGACAGCAG ACGATAGACC TGTGGATTGG CTACGACCGC CACGTACATA AGTTTATCCG TACTGCGATT GATATGGATA AAAACCGCGT CTTCGCCCAG CGCCTGCGTC AGTCGGTGCA AAGCTATTTC GATAGCCCCT GGGCGCTGAC GTTTGCCAAC GCCGATCGTC TGCTGGATAT GCGTGACGAA GAGCTGACGC TGCGTAGTGA AGAAGTGACC GGTGAATTGC CGCCGGAGCT GGAATACGAA GAGTTTAGTG AAATGCGCGA GCAGTTGATC GCGCTGGTCG AGCAGGCGCT ACATAAATAT AAAGCGCAAC AGATTCCGCT GGATTTGGGG GAAGTTATGC GTGAATACCT CGCGCAGCAT CCTCGCTCGC GGCATTTCGA TGTTGCCCGA ATCGTGGTCG ACCAGGCAGT CCGCCTGGGC GTAGCCGAAG CAGATTTCAC CGGATTGCCT GCATTGTGGC GGGCAATCAA TGATTACGGA GCCAAGGTGC AGGCCCATGT CATCGACAAA TATTGA
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Protein sequence | MSDFSQTVPE LVAWARKNDF SISLPTERLA FLMAIATLNG ERMDGEMSEG ELIDAFRHVS QGFDQTNETI TVRANNAIND LVRQRLLNRF TSEQAEGNAI YRLTPLGIGI TDYYIRQREF STLRLSMQLS IVAQELSRAA DAAEEGGDEF HWHRNVFAPL KYSVAEIFDS IDLSQRVMDE QQQGVKDDIA ALLNQDWRAA ISSCEQLLTE TSSTLRELQD TLEAAGDKLQ ASLLSIQDAI MNNAHNLEFV DKLVFDLQNK LDRIVSWGQQ TIDLWIGYDR HVHKFIRTAI DMDKNRVFAQ RLRQSVQSYF DSPWALTFAN ADRLLDMRDE ELTLRSEEVT GELPPELEYE EFSEMREQLI ALVEQALHKY KAQQIPLDLG EVMREYLAQH PRSRHFDVAR IVVDQAVRLG VAEADFTGLP ALWRAINDYG AKVQAHVIDK Y
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