| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1760 |
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| Symbol | |
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| ID | 8132702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 2031317 |
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| End bp | 2032687 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644865048 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003017337 |
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| Protein GI | 253688147 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTTG ATACATCTCT GCCTAACGCT GGCGCAAAAC GTGCTCAGTT AAAAAGAACG
CTTACGCTGT GGCCCGTTGT TATGATGGGA CTGGCGTACA TGCAGCCGAT GACCATTTTT
GATACCTTCG GTATCGTGTC TGGCCTGACC GACGGCCATG TGGCGACCGC CTATGCGTTT
GCGCTGGTGG CTATTCTGTT CACGGCGCTG AGCTATGGCA AATTGGTAAA ACGTTTCCCG
TCAGCGGGTT CTGCTTATAC CTATGCGCAA AAAGCGATCA GCCCGCACGT TGGGTTTATG
GTCGGCTGGT CATCGCTGCT GGACTATCTG TTCATGCCGA TGATCAACAT TCTGTTGGCG
AAAATCTATC TGGAAGCGAT CTTCCCCGGC GTGCCGTCGT GGATTTTTGT CGCGGTACTG
GTCGGGCTGA TGACGCTGTT TAATCTGCGT GGCATCAATC TGGTTGCTAA CCTGAACTCC
ATTATCGTGG TAGTACAGGT GGCTATCATG GCCGTGTTCC TGGGGCTGGT CATCCACGGT
GTTTATCTGG GTGAAGGTGC AGGTACGCTG ACCAGTACGC GTCCATTCTG GTCTGAGAAC
GCGCATGTGG TGCCGATGAT TACCGGGGCA ACGATTCTCT GCTTCTCGTT CCTGGGCTTT
GACGGCATCA GCTCGCTGTC GGAAGAGACG CAGGATGCCG GTCGGGTGAT TCCAAAAGCC
ATCTTCCTGA CAGCGCTGAT CGGTGGTGTG ATCTTTGTTG CCGTGGCGTA CTTTCTGCAA
CTGTACTTCC CGGACATTTC CCGCTTTAAA GAGCCGGATG CGTCTCAGCC GGAAATCATG
CTGTATGTTG CGGGTAAATT CTTCCAGTCT ATTATTCTGG TGTTCTCCTG CGTCACTGTG
TTGGCGTCCG GTATGGCCGC ACACGCCGGT GTTTCACGTC TGATGTATGT GATGGGACGC
GATGGCGTGT TCCCTGAGCG CTTCTTCGGT TATATCCATC CGAAATGGCG TACCCCGGCG
CTGAACGTCC TGCTGGTTGG CGTGATCGCA CTGTCTGCGG TGTCGTTCGA TCTGGTGACG
GCAACTGCGC TGATTAACTT CGGTGCGCTG GTGGCGTTTA CGTTCGTGAA CCTGTCGGTT
ATTTCACAGT TCTATATTCG TGAACGCCGT AACCGTACTG TGAAAGACAC CATTAACTTC
CTCGTACTGC CTGTGCTGGG CGCGTTAACG GTAGGGGCAC TGTGGGTGAA TCTGGAAGCC
AGCTCGATGA CGCTGGGTCT GGTGTGGGCA ACGATCGGGC TGCTATATCT GGCGTTTGTG
ACGCGCAGCT TCCGTCAGCC AGTACCGCAA TGCAGTGAAG AGCCAGTGTA A
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| Protein sequence | MSLDTSLPNA GAKRAQLKRT LTLWPVVMMG LAYMQPMTIF DTFGIVSGLT DGHVATAYAF
ALVAILFTAL SYGKLVKRFP SAGSAYTYAQ KAISPHVGFM VGWSSLLDYL FMPMINILLA
KIYLEAIFPG VPSWIFVAVL VGLMTLFNLR GINLVANLNS IIVVVQVAIM AVFLGLVIHG
VYLGEGAGTL TSTRPFWSEN AHVVPMITGA TILCFSFLGF DGISSLSEET QDAGRVIPKA
IFLTALIGGV IFVAVAYFLQ LYFPDISRFK EPDASQPEIM LYVAGKFFQS IILVFSCVTV
LASGMAAHAG VSRLMYVMGR DGVFPERFFG YIHPKWRTPA LNVLLVGVIA LSAVSFDLVT
ATALINFGAL VAFTFVNLSV ISQFYIRERR NRTVKDTINF LVLPVLGALT VGALWVNLEA
SSMTLGLVWA TIGLLYLAFV TRSFRQPVPQ CSEEPV
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