| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1736 |
|---|
| Symbol | ihfB |
|---|
| ID | 8132678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 2007423 |
|---|
| End bp | 2007707 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644865024 |
|---|
| Product | integration host factor subunit beta |
|---|
| Protein accession | YP_003017313 |
|---|
| Protein GI | 253688123 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.060047 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGT CTGAACTTAT TGAAAGGCTT GCTGGACAGC AATCTCATAT CCCGGCCAAA
GTGGTTGAGG ATGCAGTGAA AGAAATGCTC GAACAAATGG CTTCTACGTT AGCCGAAGGC
GATCGTATAG AAATCCGTGG GTTTGGCAGC TTTTCACTTC ACTACCGTGC ACCGCGTGTA
GGTCGTAATC CGAAAACGGG TGATAAAGTT GAGCTGGAAG GTAAGTATGT CCCTCACTTT
AAACCGGGCA AGGAACTCCG CGACCGCGCT AACATTTATG GTTAA
|
|---|
| Protein sequence | MTKSELIERL AGQQSHIPAK VVEDAVKEML EQMASTLAEG DRIEIRGFGS FSLHYRAPRV
GRNPKTGDKV ELEGKYVPHF KPGKELRDRA NIYG
|
|---|
| |