Gene PC1_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1718 
Symbol 
ID8132660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1980932 
End bp1981426 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content49% 
IMG OID644865006 
Productleucine-responsive transcriptional regulator 
Protein accessionYP_003017295 
Protein GI253688105 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.159084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGACA CTAAAAAACG GCCAGGAAAA GATCTCGATC GTATTGATCG TAACATCCTG 
AACGAATTGC AAAAAGATGG GCGTATTTCC AATGTCGAGC TGTCCAAACG TGTTGGTCTG 
TCGCCAACGC CTTGTCTGGA GCGCGTGCGT CGTCTGGAAA GACAGGGTTT CATTAACGGC 
TATACAGCGC TGCTAAACCC ACATTATCTG GATGCGTCAC TGCTGGTTTT TGTTGAAATA 
ACGCTAAACC GCGGCGCGCC TGATGTGTTT GAACAGTTCA ATGCTGCGGT GCAGAAGCTG 
GAAGAAATTC AGGAATGTCA TCTGGTTTCG GGTGATTTTG ACTACCTGTT GAAAACGCGC 
GTGCCGGACA TGTCTGCTTA CCGTAAGCTT CTGGGTGAAA CGCTGCTGCG TTTGCCGGGC 
GTAAACGACA CCCGTACTTA CGTGGTGATG GAAGAAGTGA AGCAAAGCAA CCGTCTGGTT 
ATTAAGACGC GATAA
 
Protein sequence
MVDTKKRPGK DLDRIDRNIL NELQKDGRIS NVELSKRVGL SPTPCLERVR RLERQGFING 
YTALLNPHYL DASLLVFVEI TLNRGAPDVF EQFNAAVQKL EEIQECHLVS GDFDYLLKTR 
VPDMSAYRKL LGETLLRLPG VNDTRTYVVM EEVKQSNRLV IKTR