| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1717 |
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| Symbol | |
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| ID | 8132659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1979418 |
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| End bp | 1980380 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865005 |
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| Product | thioredoxin reductase |
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| Protein accession | YP_003017294 |
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| Protein GI | 253688104 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0214207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTACCG TTAAACATCA CAAGTTATTG ATTCTGGGTT CAGGCCCCGC TGGCTATACT
GCCGCAGTTT ATGCCGCACG GGCGAACTTA CAGCCAGTAT TAATCACTGG TATGGAAAAA
GGCGGTCAGC TAACGACCAC GACCGAAGTA GAAAACTGGC CGGGCGACGC CGATGATTTA
ACAGGCCCAC TGTTAATGGA ACGCATGCAC GCGCATGCAA CCAAGTTCAA TACCGAAGTG
ATCTTCGATC ATATTGAACG TGTTGATTTG CAGAACCGTC CCTTCCGTTT ATTCGGTGAT
AGCGACGAGT ACACCTGTGA TGCGCTGATC ATCGCCACTG GCGCATCAGC TCGCTACCTT
GGCCTGCCGT CCGAAGAGGC ATTTAAAGGC AAGGGTGTTT CCGCCTGTGC AACCTGTGAC
GGATTCTTCT ACCGTAATCA GAAAGTTGCC GTGGTGGGTG GTGGGAACAC TGCCGTCGAA
GAAGCGCTGT ATCTGTCTAA CATCGCGGCA GAAGTGCATT TAATCCACCG CCGCGAAACG
TTCCGTTCAG AGAAGATTCT GATTGACCGA CTGATGGACA AAGTTAAAAA CGGCAACATC
ATCCTGCATA CCAACCGTAC GTTGGATGAA GTGCTGGGTG ATGACATGGG TGTGACCGGT
GTTCGTATCC GCGATACGCA AAGCGATGCA GCGGAAGAAC TGGAACTGGC TGGCGTATTT
ATCGCTATCG GTCACAGTCC GAATACGGCC GTGTTCGGCG GTCAGTTGGA ACTGGAAAAT
GGTTATATCA AAGTGCAATC CGGCATTCAC GGCAATGCGA CGCAAACCAG CATTCCTGGT
GTCTTTGCTG CAGGTGACGT CATGGACCAC ATCTACCGTC AGGCCATTAC CTCTGCAGGT
ACCGGTTGTA TGGCAGCGCT GGATGCTGAA CGTTATCTGG ACGGACTGAC CGTCAATAAG
TAA
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| Protein sequence | MGTVKHHKLL ILGSGPAGYT AAVYAARANL QPVLITGMEK GGQLTTTTEV ENWPGDADDL
TGPLLMERMH AHATKFNTEV IFDHIERVDL QNRPFRLFGD SDEYTCDALI IATGASARYL
GLPSEEAFKG KGVSACATCD GFFYRNQKVA VVGGGNTAVE EALYLSNIAA EVHLIHRRET
FRSEKILIDR LMDKVKNGNI ILHTNRTLDE VLGDDMGVTG VRIRDTQSDA AEELELAGVF
IAIGHSPNTA VFGGQLELEN GYIKVQSGIH GNATQTSIPG VFAAGDVMDH IYRQAITSAG
TGCMAALDAE RYLDGLTVNK
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