| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1707 |
|---|
| Symbol | |
|---|
| ID | 8132649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 1966347 |
|---|
| End bp | 1967999 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644864995 |
|---|
| Product | hydroxylamine reductase |
|---|
| Protein accession | YP_003017284 |
|---|
| Protein GI | 253688094 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1151] 6Fe-6S prismane cluster-containing protein |
|---|
| TIGRFAM ID | [TIGR01703] hydroxylamine reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTGTG TGCAATGTGA ACAAACGATT CGTACCCCTG TTGGAAACGG CTGCTCTTAC
GCGCAGGGCA TGTGCGGCAA AACCGCAGAA ACCTCCGATC TGCAAGACCT GTTGGTCGCT
GTGCTGCAAG GGCTTTCTGC CTGGGCGCTG AAAGCGCGCG AGCTGGATAT CATCGATCAC
GATGTCGACA ATTTTGCACC ACGCGCCTTC TTCTCTACAT TGACCAACGT AAACTTCGAT
TCCCAGCGCA TTATTGGCTA CGCACAGGAA GCCATCACAC TGCGTGAGTC TCTGGCGGTT
CGCTGCCGTC TGCACGATGC CACCGCGACC GTAGATCACC CAATGGCAGC GCTGCAACTG
GCTGGCAACG ATATTCCAAC CTTACTGCAA CAGGCGGCGG ATTTTGCGCT GGACAGCGAT
AAAGCTATCG TCGGCGATGA TGTTCACGGC TTGCGCATGC TCAACCTCTA CGGCCTGAAA
GGCGCGGCGG CCTATATGGA GCACGCTCAC GTTCTTGGTC AGTATGATGA CGCTATCTAT
GCCGAATATC ATGCCTTCAT GGCATGGCTG GGCACACAGC CATCCGATGT TGATACCCTG
CTGAACAACG CCATGGGTAT CGGTAAAATG AACTTCAACG TCATGGCAAT CCTCGACCGT
GGCGAAACCG ATGCTTACGG TAACCCACAG CCGACTGCGG TTAACGTCCG TCCGATTGCA
GGTAAAGCGA TTCTGATTTC CGGCCATGAC CTGAAAGACC TGCGCATGCT GCTGGAGCAA
ACCGAAGGGA CAGGCGTCAA CATCTATACG CACGGCGAGA TGCTGCCTGC ACACGGTTAC
CCAGAGCTGA AAAAATTCAA GCATCTGGCG GGCAACTACG GCAGCGGCTG GCAGAATCAG
CAGACAGAAT TCGCCAAATT CCCTGGCGCA ATCGTCATGA CCTCTAACTG CATTATCGAT
CCAAACGTCG GTAACTACGG CGACCGCATC TGGACGCGCA GCATCGTTGG CTGGCCGGGC
GTGAACCATC TGGAAGGCGA CGATTTTAGT CCAGTGATCG AACAGGCACA GAGTCTGGCT
GGCTTCCCGT ACAGTGAAAT CGAACACATG ATCACCGTCG GCTTTGGTCG CGAAACTCTA
CTGAGCGCCG CCGACACCGT GATCGATCTG GTCGCACAGA AAAAACTGCG CCACGTCTTC
CTGGTTGGCG GATGCGACGG TAGCCGTGAA GAACGTAGCT ACTTCACTGA CTTCACGCTG
AACGTTCCAC AGGACTGCCT GATCATGACG CTGGCCTGCG GTAAATACCG TTTCAACAAA
CTGGACTTCG GTACGCTGGA AGGCCTGCCG CGCCTGCTGG ATGTCGGCCA ATGTAACGAT
GCCTACTCCG CCATTATTCT GGCCGTCAAA CTGGCAGAAA AACTGGGCTG TGGCGTAAAC
GACCTGCCGC TGAGTCTGGT GCTGTCGTGG TTTGAACAGA AAGCGATCGT CATCCTGCTT
ACCCTATTGT CACTCGGCGT GAAGAACATC TACACCGGGC CGACGGCTCC GGGCTTCCTG
ACGGACAACC TGCTCGCCAT TCTGAACGAG AAATTCGGTA TGCGAGCGAT TACCACAGTT
GAACAGGACA TGAACACCAT TCTGGCTGCT TGA
|
|---|
| Protein sequence | MFCVQCEQTI RTPVGNGCSY AQGMCGKTAE TSDLQDLLVA VLQGLSAWAL KARELDIIDH
DVDNFAPRAF FSTLTNVNFD SQRIIGYAQE AITLRESLAV RCRLHDATAT VDHPMAALQL
AGNDIPTLLQ QAADFALDSD KAIVGDDVHG LRMLNLYGLK GAAAYMEHAH VLGQYDDAIY
AEYHAFMAWL GTQPSDVDTL LNNAMGIGKM NFNVMAILDR GETDAYGNPQ PTAVNVRPIA
GKAILISGHD LKDLRMLLEQ TEGTGVNIYT HGEMLPAHGY PELKKFKHLA GNYGSGWQNQ
QTEFAKFPGA IVMTSNCIID PNVGNYGDRI WTRSIVGWPG VNHLEGDDFS PVIEQAQSLA
GFPYSEIEHM ITVGFGRETL LSAADTVIDL VAQKKLRHVF LVGGCDGSRE ERSYFTDFTL
NVPQDCLIMT LACGKYRFNK LDFGTLEGLP RLLDVGQCND AYSAIILAVK LAEKLGCGVN
DLPLSLVLSW FEQKAIVILL TLLSLGVKNI YTGPTAPGFL TDNLLAILNE KFGMRAITTV
EQDMNTILAA
|
|---|
| |