Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1681 |
Symbol | |
ID | 8132623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1941039 |
End bp | 1942055 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644864969 |
Product | ABC transporter related |
Protein accession | YP_003017258 |
Protein GI | 253688068 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1135] ABC-type metal ion transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000123006 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCAGT TAGAAGGGGT AAGCGTTGAC TTCTCTCATG GGAAGCAGCC AGAAAACCGC GCGGTAGACA ACGTGTCGCT GCACATCCAG CGCGGAGAGG TTTACGGTAT TGTCGGCACT AGCGGCGCGG GAAAAAGCAC GCTGTTGCGA ACCATCAATC TCTTACAGCG TCCGACGTCA GGTCGTGTGC TCGTCAACGG TGTGCTCATC AGCGAACTGT CAGGGCAGCT TCTGCGAGAG CAGCGGCAAA AAATCGGCAT GATCTTTCAG CATTTCAACC TGATGCAGAC GCGCACGGTG GCGGAAAACG TGGCGTTTAG CCTGAAAGCC GCCGGGAAAT CCAACGCGGA TATCGCAGCG CGCGTGCCGG AAATTCTAAA TCTGGTGGGG CTGGCGGATA AAGCATCATC TTATCCGGCA CAGCTCAGCG GCGGACAGAA ACAACGCGTA GGTATTGCCC GAGCGATTGC TAACGATCCC GAAGTGTTGC TGTGCGATGA ACCAACGTCG GCGCTCGATC TGGAAACCTC TGCCGCCATT TTGGCATTGC TGAAAGAGAT TAACGACAAG CTGGGTATCA CCATCGTGCT GATTTCTCAT GAGATGAGCG TGATTAAAGC CGTCTGCGAT CGGGTCGCGG TAATGACGGA CGGTCGGGTG GTGGAAGAAG GCGATGTTTT CGATATCTTC GCGACGCCGC AGCATGCATT TACCCGCCAG TTGGTTTCCC ACACGCTCGA TTTGGCACTG CCGCCGCGTT TGCTGAAGGA TTTGCAGGGC ACACTATTAA AGATTCTATT CGTCGGCGAA TCGGCGGAGC AACCCGTGCT GTCGGATGTC GCGACGCGTT TTGGTGTGTC CGTCAACATC CTGCACGGTA AGATCGAATA CATCGGCAAT CGTGCGTTAG GCATTCTCGT GGCGCTATTG ACGCATCCAT CCGACCCCGT AAAAGTAGCG GAAGCGGTGG AACATATTCA GGTAAGAACG GCGAACGTGG AGGTGCTGCA TGGCTGA
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Protein sequence | MIQLEGVSVD FSHGKQPENR AVDNVSLHIQ RGEVYGIVGT SGAGKSTLLR TINLLQRPTS GRVLVNGVLI SELSGQLLRE QRQKIGMIFQ HFNLMQTRTV AENVAFSLKA AGKSNADIAA RVPEILNLVG LADKASSYPA QLSGGQKQRV GIARAIANDP EVLLCDEPTS ALDLETSAAI LALLKEINDK LGITIVLISH EMSVIKAVCD RVAVMTDGRV VEEGDVFDIF ATPQHAFTRQ LVSHTLDLAL PPRLLKDLQG TLLKILFVGE SAEQPVLSDV ATRFGVSVNI LHGKIEYIGN RALGILVALL THPSDPVKVA EAVEHIQVRT ANVEVLHG
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