| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1675 |
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| Symbol | |
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| ID | 8132617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1931694 |
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| End bp | 1933502 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644864963 |
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| Product | glycosyl transferase family 8 |
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| Protein accession | YP_003017252 |
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| Protein GI | 253688062 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAAC AAGATCGGAA CTTAGTACTT TCAAACCATA CACCGCAGCC AGAGAGACAA
TCAATGGTGG CAGCATCTTC TCTTGCCAAT AGCACACTGC GTGGCGATAT TCATGCTGAG
ATATTCAAAA CACTTCTCAA CCAGCATGAT ACTGACGAGG TGATGTTTGC ACTACAGCAA
CAAATGCCGC TTTCATCAGG TATTCTGGCT ACCCGCTATG TGGAAATCTG CCTGCAGTAT
GGTGCTGACA GTGGGGTAGC CAGGCTTTTT CAGCGCACAC CCGTCGCCTA CTCCTCCAGT
CACTACTACA GCCTTGTCGG CACCACAAAC CGCCTGCTCG ATGCCGGACA ATTAGAAGAA
GCTAATGCCA TCATTTCACA TTTATCAGAG TTTGCTGGCC AGCATCCAAA TACCCGCATG
CTTCACTTAA AGTACCTACT TAAAGGCCGG CGTTTTGAGG AACTTCGCCA GCAGCTCGAG
AGCATTCCCG CTCGAGATTA TAAGATGTCG GAAGCACTCG TAGCGCTTCG TACCCGCTAT
GAGTGCACTA TAGGCAATCC AGAAGCAGGG CTGGCATGGT TGGCCGACCT TGGCCCACTT
GAAACGCTAT CGGCTAACCT TATTCATTGC GCCATCCAGT GCTTGATCAG TTTAGCGCGT
TACAACGATG TTATACCTTT GCTCGAAGCA TGGTTTAACC TCGATTTTTC TTATCAGGAG
GCCGCTAAGC GTATTTTGCT GGTTGCGACC CAGACTGGAG AAACCATCAG GCTAATACGC
GCTATAGAGC AGCTGCACGG CTGGTTTACC TCACCTGATC TGATCCGCTT ACGCACCGCG
CTAATAACGT TAGATGCTAC ACAACGACGC ATTCAGCGTG AAGACGACAA GGGGGATGAA
ACCGAAAGCA CAAGCTTGAC TGCATACTAT CCGCTTGGCG TTTCTCTCTC ACCACCCCAT
CCCGTTTCTG AAAATGCCAT TTTCTTCTGT GCCGATACGG CGTACACGGC TCCGGCTATC
GTCGCCCTCA TCTCGCTGGC AATCGCCATC GAGCGTAGCG AAAATTTACC TGACATCTAT
ATTTTCGTGT TGCCGGAAGC ACATGGTCTA TGGGGACAAC TCGCCAGCAG CTTCAACAGA
GAATTTCCGT CTTTGACGCT ACGGGTAGTC TCAACGTTGC AAATGCAACT TGATCAGAGC
CGGGCACACT ACGGGTTTAA TTCCATGGGA GATATGCTGA GCACCATGGC ATACGCTCGA
CTTTATGCCA GCCGTTATCT ATCCCAATGT GGTGTAGCAC GGGCCCTATA TCTTGATTCC
GATGTAGTTA TCCAATCTTC ACCGCTGCCA CTGTTGTATA TGGATATGGA AGAATTTCCG
TTGGCTGCGT GCCATGACCA GGTGGGTCCT CTGGTTGACC ATGCAGTCAC ACTGCATGGT
ATCCCTAATG GCCGCTATTT TAACTCTGGC GTGATGCTAT TGGATTTCCA TCACCCAGCT
ACATTACCCG CAATAGAAGC TGCGATTACC TACAGTGAAG ACACAGATAG CGTCCTTATT
TTTCAAGATC AGTGCGCATT GAACAAAGCG ATTCGTGGTC TCTATCTGAC GCTGGATGGA
AAATATAACT GCTATATGCC TCCAGGTCGA CCAATGAGCG CTATGTATGA AAACGCAGCT
ATCGTCCATT TTGTCAGCAC GCCCAAGCCG TGGCACCTGG CCTATTTAGG TCAAGGGACG
GCACTTTGGT CTCGTTTTTA TGACCATGCC GTGCGAATTG TCGGAAAAGA TATTTTTCTC
TCCCTCTAG
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| Protein sequence | MPKQDRNLVL SNHTPQPERQ SMVAASSLAN STLRGDIHAE IFKTLLNQHD TDEVMFALQQ
QMPLSSGILA TRYVEICLQY GADSGVARLF QRTPVAYSSS HYYSLVGTTN RLLDAGQLEE
ANAIISHLSE FAGQHPNTRM LHLKYLLKGR RFEELRQQLE SIPARDYKMS EALVALRTRY
ECTIGNPEAG LAWLADLGPL ETLSANLIHC AIQCLISLAR YNDVIPLLEA WFNLDFSYQE
AAKRILLVAT QTGETIRLIR AIEQLHGWFT SPDLIRLRTA LITLDATQRR IQREDDKGDE
TESTSLTAYY PLGVSLSPPH PVSENAIFFC ADTAYTAPAI VALISLAIAI ERSENLPDIY
IFVLPEAHGL WGQLASSFNR EFPSLTLRVV STLQMQLDQS RAHYGFNSMG DMLSTMAYAR
LYASRYLSQC GVARALYLDS DVVIQSSPLP LLYMDMEEFP LAACHDQVGP LVDHAVTLHG
IPNGRYFNSG VMLLDFHHPA TLPAIEAAIT YSEDTDSVLI FQDQCALNKA IRGLYLTLDG
KYNCYMPPGR PMSAMYENAA IVHFVSTPKP WHLAYLGQGT ALWSRFYDHA VRIVGKDIFL
SL
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