Gene PC1_1667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1667 
Symbol 
ID8132609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1920242 
End bp1921363 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content55% 
IMG OID644864955 
ProductS-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 
Protein accessionYP_003017244 
Protein GI253688054 
COG category[C] Energy production and conversion 
COG ID[COG1062] Zn-dependent alcohol dehydrogenases, class III 
TIGRFAM ID[TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATGA TTAAAACCCG TGCCGCCATC GCCTGGGGTC CCAACCAACC CTTGTCGGTT 
GAAGAAGTGG ATCTGATGCC ACCACAGAAA GGTGAAGTCC TGGTACGCAT CGTCGCAACT 
GGCGTGTGTC ACACGGATGC CTATACCCTG TCCGGCAAAG ATCCTGAAGG CGTATTCCCG 
GCGATTCTTG GCCATGAAGG CGGCGGGATT GTTGAAGCTA TTGGGGAAGG CGTAACCAGC 
GTCGCTGTCG GCGATCACGT GATCCCGCTT TACACACCAG AATGTGGCGA GTGTAAATTC 
TGTCGCTCCG GCAAAACCAA CCTGTGTCAG GCTATTCGCT CCACGCAGGG CAAAGGCCTG 
ATGCCAGACG GCACTACTCG CTTCTCCAAA AACGGCCAGC CGATTTTCCA TTACATGGGC 
ACCTCCACCT TCGCAGAACA CACCGTCGTG CCTGAGATTT CGCTGGCGAA AGTCAATAAA 
GAAGCGCCAC TGGAAGAAGT CTGCCTGCTG GGCTGCGGCG TGACCACCGG CATGGGTGCC 
GTGCTGAATA CGGCAAAAGT TAAAGCGGGC GATACGGTTG CGATTTTCGG TCTCGGCGGC 
ATTGGCCTGT CGGCGATTAT CGGTGCGCAA ATGGCCGGTG CCGGACGTAT CATCGGTGTC 
GATCTCAATA CCAGCAAATT CGAGCTGGCA CGTAAACTCG GTGCCACCGA CCTCATCAAC 
CCGAAAGATT ACGATAAGCC GATTCAGGAC GTCATCGTTG AGCTGACCGA TGGCGGCGTA 
GACTTCTCTT TCGAATGTAT CGGTAACGTT AATGTCATGC GTTCCGCGCT AGAGTGCTGT 
CATAAAGGCT GGGGTGAATC CATCATCATC GGCGTGGCTG GTGCAGGTGA AGAAATCGCT 
ACCCGTCCGT TCCAACTGGT GACTGGTCGC GTATGGCGCG GTTCTGCCTT CGGCGGCGTA 
AAAGGCCGTA GCGAACTGCC AGGTATTGTC GATCGCTACC TGAAAGGCGA ATTCCCGCTG 
AATGACTTCA TCACCCACAC CATGGGGCTT GACGAGATCA ATACAGCATT CGATTTAATG 
CACGAAGGCA AATCGATTCG CACTGTGATT CATTTCGGTT AA
 
Protein sequence
MQMIKTRAAI AWGPNQPLSV EEVDLMPPQK GEVLVRIVAT GVCHTDAYTL SGKDPEGVFP 
AILGHEGGGI VEAIGEGVTS VAVGDHVIPL YTPECGECKF CRSGKTNLCQ AIRSTQGKGL 
MPDGTTRFSK NGQPIFHYMG TSTFAEHTVV PEISLAKVNK EAPLEEVCLL GCGVTTGMGA 
VLNTAKVKAG DTVAIFGLGG IGLSAIIGAQ MAGAGRIIGV DLNTSKFELA RKLGATDLIN 
PKDYDKPIQD VIVELTDGGV DFSFECIGNV NVMRSALECC HKGWGESIII GVAGAGEEIA 
TRPFQLVTGR VWRGSAFGGV KGRSELPGIV DRYLKGEFPL NDFITHTMGL DEINTAFDLM 
HEGKSIRTVI HFG