| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1655 |
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| Symbol | |
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| ID | 8132597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1905195 |
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| End bp | 1906040 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644864943 |
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| Product | endonuclease IV |
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| Protein accession | YP_003017232 |
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| Protein GI | 253688042 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0156974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACA TCGGGGCACA CGTTAGCGCA TCTGGCGGGG TCGATCAGGC CGTGATTCGC
GCTCATGAGA TAAAGGCGAC GGCTTTCGCG TTGTTTACCA AGAACCAGCG CCAATGGCAG
GCTGCGCCGC TCAGCACCGA GGTCATCGAC CGTTTTAAAG CCGCCTGTGA ACAGTATGCC
TATACGTCAG CACAAATTCT TCCCCACGAC AGTTACCTGA TTAATCTGGG ACACCCGGAC
GCCGAGGCGT TAGAGAAATC ACGTATCGCG TTTATTGATG AAATGGCCCG CTGTCAGCAA
CTTGGGCTCA GCCTGCTGAA TTTTCACCCA GGTAGCCATC TGAAACAGAT CGAAGAAGCA
GACTGTCTGG CCCGTATTGC GGAGTCCATC AACATCGCGC TGGCGGAAAC GGACGGGGTC
ACCGCCGTGA TTGAAAATAC CGCCGGACAA GGCAGTAATC TCGGATTCCG TTTTGAGCAT
CTGGCGGCCA TCATTGACGG TGTAGAAGAT AAAAGCCGTG TTGGCGTCTG TATCGATACC
TGTCATGCCT TCGCTGGCGG CTACGACCTA AGGACGGAAG CGGATTGCGA AGCGACCTTT
GCAGAATTTG ATCGCATCGT TGGGTTTCGC TATCTGCGAG GAATGCATTT GAATGATGCG
AAAAGCGCAT TCGCCAGTCG CGTTGACCGA CACCATAGCC TGGGAGAAGG CAATATCGGC
AAAACGGCCT TCAGCTACAT CATGAAAGAT GCCCGTTTTG ATGGGATCCC AATGATTCTG
GAGACAATCA ATCCCGATAT CTGGGCTGAC GAAATCGCCT GGCTCAAGTC CGAAGCCCAA
TGTTAA
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| Protein sequence | MKYIGAHVSA SGGVDQAVIR AHEIKATAFA LFTKNQRQWQ AAPLSTEVID RFKAACEQYA
YTSAQILPHD SYLINLGHPD AEALEKSRIA FIDEMARCQQ LGLSLLNFHP GSHLKQIEEA
DCLARIAESI NIALAETDGV TAVIENTAGQ GSNLGFRFEH LAAIIDGVED KSRVGVCIDT
CHAFAGGYDL RTEADCEATF AEFDRIVGFR YLRGMHLNDA KSAFASRVDR HHSLGEGNIG
KTAFSYIMKD ARFDGIPMIL ETINPDIWAD EIAWLKSEAQ C
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