| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1652 |
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| Symbol | |
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| ID | 8132594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1901232 |
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| End bp | 1902365 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864940 |
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| Product | bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein |
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| Protein accession | YP_003017229 |
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| Protein GI | 253688039 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0538047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCAGT TGTCACAGCA AGATATTCAT TTGGGCGCAG CGGCCAGTAA TAAGCAGGAA
GCCATCCAGC TTGTTGCTTC AGCACTGACC GAGGCCGGGT GCGTTAACGC AGGGTATGTC
GACGGCATGC TACAGCGCGA ACAGCAGACA TCCACCTATT TGGGAAGCGG CATTGCTATC
CCTCACGGCA CCACCGATAC CCGCGATCTG GTATTGAAGA CCGGGGTTCA AGTATTCCAG
TTTCCTCAGG GTATCGCCTG GGGTGAAGAT CAAACCGCCT ATGTGGTGTT GGGGATTGCA
GCCCGCTCTG ATGAACACCT TGCGCTGCTG CGTCAGCTGA CTCACGTTCT GAGCGACGAT
CGCGTAGCGG CACGTTTGGC AAGCACCACA TCAGCAGAAG AACTGCGTAG CTTGCTGATG
GGCGAGCAAC AGCTGGCAGA ATTCCGCTTT GACACCTCGC TGATTGCGCT GGACGTGGCG
ACCGATAACC TGCTGACCCT TCAGGCGCTG AATGCCGGTC GTCTTCAGCA GGTCGGTGCA
GCAGACGCCA GCTTCGTCAG CACCGCTGTC AGCAACAAGC CGCTGAATCT GGGACAAGGT
GTATGGTTCA GCGATAGCGC TGTCGGTAAT CTCAGCAGCG CGGCGGCAGT CGCTCGTCCA
GCGACGCCTT TCAGCGTTGA CGGTGAAAAC GTGGCGTTAC TGGTAACGGT AGCTGCGGCT
GACGATCAGG CTTTTGCGCC GATCGATTAC CTGAGCAATC TGCTGATTGC ACAAAAAGCA
GAACGGCTGC TGACGGCTGA TGCACCGACG CTGCTGGCTC TCTTGACCAG CGATGTACCG
GAAGAAAGCG AAGTGCTGAC AGCGGAATTT ACCATTCGTA ACGAACACGG CCTGCACGCG
CGTCCGGGCA CCATGCTGGT GAATGTGATC AAACAGTTCA CCAGTGAGAT TACGGTGACC
AATCTGGATG GCACAGGCAA ACCGGCAAAT GGCCGCAGCC TGATGAAAGT CGTCGCGCTG
GGCGTGAAAA AAGGTCACAA ACTGCGCTTC ACCGCCAGCG GTAGCGATGC AGAACAAGCA
CTGGCTGCTA TTGGCGACGC AATTACGTCC GGTTTGGGCG AGGGGGCAGC ATGA
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| Protein sequence | MFQLSQQDIH LGAAASNKQE AIQLVASALT EAGCVNAGYV DGMLQREQQT STYLGSGIAI
PHGTTDTRDL VLKTGVQVFQ FPQGIAWGED QTAYVVLGIA ARSDEHLALL RQLTHVLSDD
RVAARLASTT SAEELRSLLM GEQQLAEFRF DTSLIALDVA TDNLLTLQAL NAGRLQQVGA
ADASFVSTAV SNKPLNLGQG VWFSDSAVGN LSSAAAVARP ATPFSVDGEN VALLVTVAAA
DDQAFAPIDY LSNLLIAQKA ERLLTADAPT LLALLTSDVP EESEVLTAEF TIRNEHGLHA
RPGTMLVNVI KQFTSEITVT NLDGTGKPAN GRSLMKVVAL GVKKGHKLRF TASGSDAEQA
LAAIGDAITS GLGEGAA
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