Gene PC1_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1616 
Symbol 
ID8132557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1867012 
End bp1868124 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content44% 
IMG OID644864903 
ProductRadical SAM domain protein 
Protein accessionYP_003017193 
Protein GI253688003 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.230625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAGG TGCTGAGAAA CGATATTTTC CGTTTTACAG CGGAGAACAC GGTTGAAATG 
GGGTTCTATC GGTTGTGCAA AAAGAAGCCC GTTGATCCAC AATTTTTTCT GCCAAATTTA 
CTGATCCAAC CCTCTTTTGA TGATGGTGCG GCTGCACCTT ATTATTCAGG CACTATCGTC 
AGTAATCAGC TATACGAGTC CGTAGAAGAT GGCGATATTG GCGTTGTGAA TAATGGCAAT 
ATGCTCAGAG TGATTTTGTC TCGCCGAGCG AATCATAATA CTGTCCTTGT GACGGAAAGA 
TGTAATAACC GATGCCTGTT CTGCTCTCAG CCGCCAAAAA CGCCCAATGA TGACTGGCTT 
CTTACACAGT CTGCCCTTGC GATTGCGGCA TTTAACTTTA ATGGGCTTGT CGGGGTCAGT 
GGTGGTGAGC CTCTGCTATA TGGCGAAGAA TTTCTCTCAT TTCTTGATTT CGTTATTGAT 
AATGCTCCTG ATACCTCACT GCATGTATTA ACCAATGGCC GACAGTTTGC TGATGCACGC 
TTTGCCGAAA AGGTGAGGGA ACGAAGCAAA AGAATGAATA TCACCTTTGG TATCCCGCTT 
TACTCTTCAC GACAGCAAAT TCATGATCAT CTTGTGGGGA GTGATGGAGC TTTCAGGGAT 
ACCGTTAAGG GCTTAATTAA CGCAGGAAAT TCAGGCATCA ACATTGAATT AAGGATCATC 
CCAACAAAAG CGAATTATCA CGATCTTGCT GATGTGGTGG AATATATTGG CAGGATTTTT 
TCTAACATCA GCCAGATCTC CATTATGGGA TTGGAATCTA TTGGCTGGGC AAGAAAGAAC 
TGGGATGAGA TTTTTGTCAC CCACGATTCG TATGCGACCT CTCTGTCCTT AGCTACCGAG 
ACGGCTAACA GAGCGGGTAT CCCGTTGGTG ATATTCAATT ACCCGCTGTG TCACCTGCCT 
GAGTCTTTGT GGGATTATTC AACACAATCT ATTTCTGACT GGAAAAACTA CTATCCAGAA 
GCGTGTGATT CATGCAGTAA AAAACCATCC TGTGCAGGTT ATTTTTCCTC ATCAAAAGGC 
CGTTTTCATC AAATGCCGAG ACCAATCCTA TGA
 
Protein sequence
MSEVLRNDIF RFTAENTVEM GFYRLCKKKP VDPQFFLPNL LIQPSFDDGA AAPYYSGTIV 
SNQLYESVED GDIGVVNNGN MLRVILSRRA NHNTVLVTER CNNRCLFCSQ PPKTPNDDWL 
LTQSALAIAA FNFNGLVGVS GGEPLLYGEE FLSFLDFVID NAPDTSLHVL TNGRQFADAR 
FAEKVRERSK RMNITFGIPL YSSRQQIHDH LVGSDGAFRD TVKGLINAGN SGINIELRII 
PTKANYHDLA DVVEYIGRIF SNISQISIMG LESIGWARKN WDEIFVTHDS YATSLSLATE 
TANRAGIPLV IFNYPLCHLP ESLWDYSTQS ISDWKNYYPE ACDSCSKKPS CAGYFSSSKG 
RFHQMPRPIL