| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1528 |
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| Symbol | |
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| ID | 8132469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1782000 |
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| End bp | 1783433 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864817 |
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| Product | ATP-dependent RNA helicase RhlE |
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| Protein accession | YP_003017107 |
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| Protein GI | 253687917 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.515167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTTG ATTCTCTCGG CCTGAGTGCC GATATTCTGC GCGCGATTGA CGAGCAGGGT
TATCGCGATC CTACCCCTGT TCAGCGTCAG GCTATCCCTG TCGTGCTGGA AGGGCGCGAT
TTGATGGCCA GTGCCCAAAC GGGTACGGGT AAAACGGCGG GCTTTACGCT GCCATTATTG
CAACTGCTGA ACAGCCGTGA AGCGCAGAAT AAAGGGAAAG GCCGTCGTCC GGTTCGAGCG
CTGATTCTGA CGCCAACCCG TGAGCTGGCA GCGCAGATTG ATGAGAATGT GAAGGCGTAT
AGCAAATATC TGCGCCTGCG TTCACTGGTC GTATTCGGTG GGGTGAGCAT TAACCCACAG
ATGATGAAAC TGCGTGGCGG CGTGGATATT CTGGTGGCGA CGCCAGGGCG TCTGCTCGAT
CTGGAACACC AGAACGCCGT TGACCTGTCA CAGATTGAAA TTCTGGTGCT GGATGAAGCA
GACCGTATGC TGGATATGGG CTTCATTCAC GATATTCGTC GTGTACTGGC GAAGCTGCCT
GCTAAACGCC AAAACCTGCT GTTCTCCGCG ACCTTCTCTG ATGAGATCAA AGCGCTGGCG
AACAAACTGC TGACCAATCC AGCCTCGGTT GAAGTCGTGC GTCGTAATAC GCCGTCTGAA
CTGGTGACGC AGCACGTGCA TTTTGTCGAT AAGCGCCGCA AGCGTGAACT GCTGTCACAG
CTGATTGGTG AAAACAACTG GCAGCAGGTA CTGGTCTTTA CCCGAACCAA ACACGGCGCT
AACCATCTTG CTGAACTGCT GGAAAAAGAC GGTATTACCG CTGCGGCTAT CCACGGTAAT
AAAAGCCAGG GGGCGCGTAC CCGTGCGCTG GCAAACTTCA AAGACGGCAG CATTCGCGTG
CTGGTCGCGA CCGATATTGC CGCGCGTGGT CTGGATATCG ATCAACTGCC GCACGTGGTG
AATTATGAGC TGCCAAACGT GCCGGAAGAT TACGTTCACC GTATCGGTCG TACCGGTCGT
GCGGAAGCGA CGGGCGAAGC GCTGTCGCTG GTGTGTGTGG ATGAGCACAA GCTGCTGCGT
GACATCGAAC GTCTGCTGAA GCGTGAAATT CCGCGTATCG CTATCGAAGG TTACGAGCCG
GATCCGTCTA TCAAGGCTGA GCCGATTGTG AATGGTCGTC AGGGCAACCG TGGCGGCGGC
GGGGCGCGCA ATGGATCGCC GCGCGCGCAG TCTGGTGCGC CACGCGGCCA GTCCGAGCGT
AGTCAAGGTC AGAGTGAACG TCGCTCGGCC GATGGCAATC GTCAGCCGCG TAAATCAGGC
GGCAATAGCG ATAGCCCGTG GGGTGGTAAT AAAGGCAACG GCGGCAAAGG CAATGGCGAA
GGGCAGCGCC GCGCGCCGCG TCCGCAAAAC CGCAGTAAAC CAGCAGACAA GTAA
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| Protein sequence | MSFDSLGLSA DILRAIDEQG YRDPTPVQRQ AIPVVLEGRD LMASAQTGTG KTAGFTLPLL
QLLNSREAQN KGKGRRPVRA LILTPTRELA AQIDENVKAY SKYLRLRSLV VFGGVSINPQ
MMKLRGGVDI LVATPGRLLD LEHQNAVDLS QIEILVLDEA DRMLDMGFIH DIRRVLAKLP
AKRQNLLFSA TFSDEIKALA NKLLTNPASV EVVRRNTPSE LVTQHVHFVD KRRKRELLSQ
LIGENNWQQV LVFTRTKHGA NHLAELLEKD GITAAAIHGN KSQGARTRAL ANFKDGSIRV
LVATDIAARG LDIDQLPHVV NYELPNVPED YVHRIGRTGR AEATGEALSL VCVDEHKLLR
DIERLLKREI PRIAIEGYEP DPSIKAEPIV NGRQGNRGGG GARNGSPRAQ SGAPRGQSER
SQGQSERRSA DGNRQPRKSG GNSDSPWGGN KGNGGKGNGE GQRRAPRPQN RSKPADK
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