Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1492 |
Symbol | |
ID | 8132433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1742194 |
End bp | 1743114 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644864782 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003017072 |
Protein GI | 253687882 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAATT ATTTTATTAA ACGACTACTG GGACTGATTC CCACGCTCCT GATTGTGATG GTGCTGGTGT TCCTGTTCGT TCATCTGTTA CCCGGCGACC CGGCGCGTTT AGCTGCCGGG CGGGAAGCGG ATGCCGCCGT CATCGAGATG GTGCGGCAGG ATTTGGGATT GGATAAATCG CTGCCGCATC AGTTTTGGCA CTTCTTTACC AATATCCTAC AAGGCGATTT GGGGACGTCG ATGGTGTCGA AACGCCCAGT CACGGAAGAG ATCGCCATGC GTTTTATGCC AACCTTCTGG CTGACGGTAT GCAGCATGGT GTGGGCGGTA ATTTTTGGTA TGGCGATCGG CATCGTATCG GCGGTGTGGC GCAACGGCTG GCCTGATAGG ATCGGAATGA CGCTGGCGGT ATCCGGCCTC TCTTTCCCTG CCTTTGCGCT CGGAATGCTG TTAATGCAGA TTTTTTCTGT CGAATTGGGC TGGTTGCCAA CGGTGGGGGC GGACACCTGG CTGCACTATA TTTTGCCTTC GTTGACGCTT GGCGCGGCGG TGGCGGCGGT GATGGCGCGT TTTACCCGCG CGTCGTTTGT TGATGTGTTG CAGGAAGACT ACATGCGTAC GGCACGAGCA AAAGGCGTGC GTGAATCGCT GGTTGTGGTG AAGCATGGGC TGCGCAATGC GTTGATTCCC GTGGTGACGA TGATGGGGCT GCAATTTGGT TTCTTGCTCG GCGGTTCAAT CGTTGTGGAG AAGGTTTTCA ACTGGCCAGG GCTGGGACGG TTGCTGGTGG ATGCGGTGGA GATGCGTGAT TATCCGGTGA TTCAGGCCGA GGTGCTGCTG TTTTCGCTGG AGTTTATTCT GATCAATCTG CTGGTGGATA TGCTGTATGC CGCGATTAAT CCAGCCATTC GTTACAAATA A
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Protein sequence | MLNYFIKRLL GLIPTLLIVM VLVFLFVHLL PGDPARLAAG READAAVIEM VRQDLGLDKS LPHQFWHFFT NILQGDLGTS MVSKRPVTEE IAMRFMPTFW LTVCSMVWAV IFGMAIGIVS AVWRNGWPDR IGMTLAVSGL SFPAFALGML LMQIFSVELG WLPTVGADTW LHYILPSLTL GAAVAAVMAR FTRASFVDVL QEDYMRTARA KGVRESLVVV KHGLRNALIP VVTMMGLQFG FLLGGSIVVE KVFNWPGLGR LLVDAVEMRD YPVIQAEVLL FSLEFILINL LVDMLYAAIN PAIRYK
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