| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1452 |
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| Symbol | |
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| ID | 8132391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1703154 |
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| End bp | 1704410 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864742 |
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| Product | drug resistance transporter, Bcr/CflA subfamily |
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| Protein accession | YP_003017034 |
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| Protein GI | 253687844 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.266521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGATT CGTCTTTACT GGCGTCGCGC AGTTTTATTC TCATCGGCAT TTTAGGCATT
CTGTGCGCGT TTGATGCCAT GTCGATTGAT ATGTATCTCC CGGCTTTCCC TGCGATCCAG
CAGGATATCG GGGCGGACGC GGCGGGAATG CAGACCTCGC TGTCGGTCTT TTTGATCGGG
CTGGCGCTTG GTCAACTGGT CTATGGTCCG TTGACCGATC GCTATGGTCG AAAAGGGCCG
CTGCTGCTGG GCATTGTGCT GTTTTCTGTG TCTTCTTTGC TGATCGCCCA TGCTTCCACG
CTATCGTGGT TTGTCTTTTT CCGTCTGATG CAGGGCCTCG GCGGTGCCGC CGGATTGGTG
ATCCCGCGAG CCATCGTGGC AGATTTGTAC TCGGAACGCG ATGCTGCAAA AGTGTTCTCG
CTGCTTATGC AGGTGATGGC GATAGCGCCG ATTGTCGCGC CGCCATTGGG CAGCGTGCTG
CTCGGCACGC TGGGATGGTC AGCTATTTTT TGGGTACTGA CGGTTGTCGG TATGCTGATG
CTGTTCGCCA CCTGGCGCTG GGTGCCGGAA AGCCTGCCGC GGCGTGACCG CGTCGCCGGC
GGCACGTTGT CAGCGTTAAC CGGCTTTGCC ACACTCCTGC GGCAGAGAAA ATTCATGGGC
TATACGCTGT CCGGCTCTTT CGTGATGGGC GGCCTGTTTA CCTATATTGG CGCGTCTGCC
TTCATCTTTA TTGAATATTT TCACCTGTCG CCCACGACTT ACAGCTACAT TTTTGCGTCG
AATGCGCTGG GTATGGTGGC GCTGGGACAA ATTAATATCT TTCTGCTGAA CCGCTGGCGT
GAATATCAAA TCTTGCCAGT TGGGATCGCC CTGCATGTCG TGGGAGGCCT GGTGCTGTCC
GGCGTGTTGC TGGCTGGCAT TGCATCGCTG TGGGTTGTCA CGGCATTGTT ATTCCTGACC
ATGAGCTTCC TGAGTCTGGT GTTCGGTAAC GTGGTGGCCG TGGCGATGAA TGCGGCACCG
GGGCAGACTG GTTCGGCTTC CTCGCTGCTC GGCGTATTGC AGTATGTTTT TGGCGGGGTC
GCTGGCGTGA TCATGGGTGT CGTGCATGAT GGCACGCTGC TTCCGCCGGT GATGTTACTC
ACGACCTGTG CAATAGGCGC ACTGCTGAGC TGGTGGTATG CCGCGCGGCA GGCGGATATC
AATCGTGTGG AAGAGGCGTT AGCCGATGGC CGCGTGCCGG AAAAGGAAGG GCGCTGA
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| Protein sequence | MSDSSLLASR SFILIGILGI LCAFDAMSID MYLPAFPAIQ QDIGADAAGM QTSLSVFLIG
LALGQLVYGP LTDRYGRKGP LLLGIVLFSV SSLLIAHAST LSWFVFFRLM QGLGGAAGLV
IPRAIVADLY SERDAAKVFS LLMQVMAIAP IVAPPLGSVL LGTLGWSAIF WVLTVVGMLM
LFATWRWVPE SLPRRDRVAG GTLSALTGFA TLLRQRKFMG YTLSGSFVMG GLFTYIGASA
FIFIEYFHLS PTTYSYIFAS NALGMVALGQ INIFLLNRWR EYQILPVGIA LHVVGGLVLS
GVLLAGIASL WVVTALLFLT MSFLSLVFGN VVAVAMNAAP GQTGSASSLL GVLQYVFGGV
AGVIMGVVHD GTLLPPVMLL TTCAIGALLS WWYAARQADI NRVEEALADG RVPEKEGR
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