Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1449 |
Symbol | |
ID | 8132388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1698252 |
End bp | 1699217 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644864739 |
Product | response regulator receiver modulated CheW protein |
Protein accession | YP_003017031 |
Protein GI | 253687841 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.199084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATT TTCAAAAAGA GATTGATGAG AGAACAAACC TCACCTCTGC TAATAAATTC GAACTCTTAT TATTCCAGCT GGGCAAATCA CCTGAAGGTG GCAAATCTGA GCTGTTTGGC ATCAACGTGT TTAAACTGCG TGAAATTGTG CCAATGCCTA CATTGACCAA AGCGGCTGGC ATGAAATCGC CGATGCTGGG TATGGTCAAT ATTCGCGGGC AAATCATTCC CGTTATCGAT CTTCCTGCTG TGGTCGGCAG TTCACCGGAT ACGGGCCTGA ACATCCTCCT TATCACTGAG TATGCTCGCA GTACGCAGGC ATTCGCGGTG GAATCGGTAG ACGATATTGT TCGTCTGGAA TGGAGCCAGG TTCTGGCTGC TGAAGCGGGC GTGAGTAGCT CGTATATCAC CAGTATCGCG CGTCTTGATA ACGACAAAGA CAGTAATCGT CTGGCGCTGG TGCTGGATGT TGAACAGATT CTGTTTGATA TCATTCCTGG CGAGCGCGAA ACTAAGCTCA AGAATTCAGA AGAGAAAATT TATCCCTATA CGCCTGGGGC GATTGCGATT GTGGCGGAAG ATTCCAAAGT TGCTCGTTCC TTGCTTGAGC AGGGACTGAC CCAGATGGGC ATTCCGTTTA GTATGCACAT CACCGGACAG GATGCCTGGA ATAAGATTCG ACAGATTGCG CAAGAAGCGC AGTCGGAAGG CCGACCTATT TCGGACAAGA TTTCACTCGT CCTGACCGAT TTGGAAATGC CGGAAATGGA CGGCTTTACG CTGACCAGAA ATATCAAGCG TGAAGAATTC CTGAAGAATA TTCCTGTCGT GATTCACTCT TCACTGTCGG GTAGTGCGAA CGAAGATCAC GTACGCAATG TGGGTGCAGA TGCCTACGTC GCGAAATTCG AGATCAACGA ACTGTCGTCG GCGATTCAGA CGGTGTTAAA TAAAGTACGT CGTTAA
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Protein sequence | MDNFQKEIDE RTNLTSANKF ELLLFQLGKS PEGGKSELFG INVFKLREIV PMPTLTKAAG MKSPMLGMVN IRGQIIPVID LPAVVGSSPD TGLNILLITE YARSTQAFAV ESVDDIVRLE WSQVLAAEAG VSSSYITSIA RLDNDKDSNR LALVLDVEQI LFDIIPGERE TKLKNSEEKI YPYTPGAIAI VAEDSKVARS LLEQGLTQMG IPFSMHITGQ DAWNKIRQIA QEAQSEGRPI SDKISLVLTD LEMPEMDGFT LTRNIKREEF LKNIPVVIHS SLSGSANEDH VRNVGADAYV AKFEINELSS AIQTVLNKVR R
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