| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1436 |
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| Symbol | |
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| ID | 8132375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1682841 |
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| End bp | 1684850 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864726 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003017018 |
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| Protein GI | 253687828 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA CGCGTCTTTA TCCGCTTGCC TTAACCGGCA TATTTCTCTC TTCCTGTGTC
TTTGCAGCTC AGGAAGATAC GCTTGTTGTC TCCGCCAGCA AACAGTCACC CTATTCTGCC
TCGGCCAATA ACGTCTCTTC CACCGTCGTC ACGGCACCGG AACTGAAAGA TGCGGGTGTC
ACCAGCACCG ACAAACTGAC CCGCGTGATG CCTGGCCTAA ACCTCGGCAA TAACGGTAGC
CTGCTGTTCC CCTCCATCTC ACTGCGCGGC GTGTCTTCCG CACAGGATTT CTACAGCCCG
GCGGTGACAG TCTACGTGGA CGGCGTACCA CAGCTCGCCA CTCACACCGT GCAGGCACTC
TCCGATGTAG AAAGCATCGA AATGCTGCGA GGCCCGCAGG GAACGCTATA CGGTAAAAGC
GCACAGGGCG GTATTATCAA TATCGTGACT CAGCAGCCGG ACAGCACGCC GCGTGGCTAT
GTCGAAGGCG GCGTAGCCAG CCGCGATGGC TATCACGGCA AAATCAATCT CAGCGGTCCC
ATTCAGGATG GCCTGCTATA CGGCAGTGTC ACCCTGCTGC GTCAGGTCGA TTCGGGGGCG
ATGACCAACC CCGCGACGGG CAGCGATAAC CTCGGCGGGA CAAAATCCAG CGTCGGGAAC
CTTCGGCTAC GTCTGGCTCC CGAGGGCCAA CCGTGGGAAA CCAGTCTAGC ACTAACGGAA
GACTGCACGC GCGCCACGCA GGATACCTAT CTGCCGTTTG GCGATGTGAA AAGCCGGACG
CTGGAGATCG CCGCCGGATC GCCGGATCCC AAACTACGCC GCTGCACCCA TAGCCAGTCG
CTGAGCGGGA AATACACTAC CGACAACTGG ATCTTCAGCC TGATCGGCGC ATGGCAGCAG
CAAAATTACG AGCGTACCTT CCCGAACAGT ACGCTGATTG CCGACATGCC GGAGCGCTGG
AATCAGGACG TGCAGGAACT GCGTGCAGCG ACACACGGCG CAGGCCGCAC GGTGGATATG
GTGTTCGGCC TGTACCGACA GAACACGCGT GAAAAACTCG ATTTAACCTA TAGCATGGCA
GGCTCTCCGT TTATGAAGAG CAATGCCAAC ACGTCAACGG AGACGTTAGC CGCCTACAGC
GATCTGACCT GGCACCTGAC CGACCGTATC GATCTGGGCG GCGGACTGCG TGTGTCACAC
GATAAAGCTA AAACCCGTTA CCACCAGCAG TTCTCCGGCA TGAGCGCGAG CGACAGCAAT
AGCGTTGATG ACGATCAGGT ACTGGGACAG CTCTCCGCCA GCTACCTGCT GAACAATGAT
TGGCGTGTCT ATACCCGCGT CGCGCAAGGC TACAAGCCAA CTGGCTTTAA CTACTCGCCC
GCCGCTGGCA CTCAGGCCAT TCCTTATAAT GCGGAGAAAT CGATTAACTA TGAAATCGGC
TCGCGCTATC AGAACGGCGA TGTGCAACTT CAGGGTGCCG TGTTTCATAC CCACACGCGT
GATATGCAGC TGTATTCCGG CCCGGTCGGT ATGCAAACAC TCAGCAATGC AGGCAGCGCC
GACGCCAGTG GCGTAGAGAT GATGCTGAAG TGGCAGTTCG TTCCCAACTG GTCATGGGAT
ATCAACGGCA CTTATGTCCG TTCTGAATTT ACCAGTGACA GTGAGAGCTA TCAGGATAAA
CGCGTGCCTT TCGTACCGCG CTACGGTGCC GGTACCAGCC TGAACGGGTT GATTGATACC
TCATTCGGCG CATTAATGCC GCGTCTGGCC TTCAACGTAG TAGGTCCGCA CTACTTCGAC
GGCGACAACG CGTTGCGTCA GGGCACCTAT ACCACGACCG ACCTGCGCCT CAGTTGGCAG
GCCACTGACC GGGTGAATAT CGCCGGCTAT GTGGATAACG TCTTCGACCG CCGCTACCGC
ACCTTTGGCT TCATGAGCGG CACCTCGGGC TACGCACAGG TCAATGAAGG CCGAACCGTT
GGCGTGGACG TGCGGGTCGA TTTGTTCTGA
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| Protein sequence | MKITRLYPLA LTGIFLSSCV FAAQEDTLVV SASKQSPYSA SANNVSSTVV TAPELKDAGV
TSTDKLTRVM PGLNLGNNGS LLFPSISLRG VSSAQDFYSP AVTVYVDGVP QLATHTVQAL
SDVESIEMLR GPQGTLYGKS AQGGIINIVT QQPDSTPRGY VEGGVASRDG YHGKINLSGP
IQDGLLYGSV TLLRQVDSGA MTNPATGSDN LGGTKSSVGN LRLRLAPEGQ PWETSLALTE
DCTRATQDTY LPFGDVKSRT LEIAAGSPDP KLRRCTHSQS LSGKYTTDNW IFSLIGAWQQ
QNYERTFPNS TLIADMPERW NQDVQELRAA THGAGRTVDM VFGLYRQNTR EKLDLTYSMA
GSPFMKSNAN TSTETLAAYS DLTWHLTDRI DLGGGLRVSH DKAKTRYHQQ FSGMSASDSN
SVDDDQVLGQ LSASYLLNND WRVYTRVAQG YKPTGFNYSP AAGTQAIPYN AEKSINYEIG
SRYQNGDVQL QGAVFHTHTR DMQLYSGPVG MQTLSNAGSA DASGVEMMLK WQFVPNWSWD
INGTYVRSEF TSDSESYQDK RVPFVPRYGA GTSLNGLIDT SFGALMPRLA FNVVGPHYFD
GDNALRQGTY TTTDLRLSWQ ATDRVNIAGY VDNVFDRRYR TFGFMSGTSG YAQVNEGRTV
GVDVRVDLF
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