Gene PC1_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1394 
Symbol 
ID8132333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1628952 
End bp1629905 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content53% 
IMG OID644864684 
Producttranscriptional regulator CysB-like protein 
Protein accessionYP_003016976 
Protein GI253687786 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACTTTC AGCAACTGAA GATTATTCGT GAATCAGCAC GGTGCAATTA CAACCTGACC 
GAGGTGGCGA ATACGCTGTT TACCTCTCAA TCCGGCGTGA GCCGCCATAT CCGCGAGCTG
GAAGAAGAGC TGGGGATTGA AATCTTCATT CGCCGTGGCA AACGCCTGTT AGGTATGACC
GAACCGGGAA AAGAGCTGCT GGTGGTGGCG GAGCGCATTC TGAATGACGC CAGCAATATC
CGGCGGCTGG CGAATGTTTT CACCAATAAC GATACCGGCC AGTTGGTGAT TGCGACCACG
CATACGCAGG CGCGTTACAG CCTGCCGCCG GTGATTAAAG CCTTCCGTTC TCTGTACCCA
CAGGTGCGTC TGGTGCTGAA TCAGGGCACG CCGGATGAGA TTGTGGCGAT GCTCCATTCC
GGTGAAGCGG ATATCGGTAT TGCCAGTGAG CAGTTGATTA ACGATCCCTC GCTGGCAGCG
TTCTCCTACT ATCGCTGGCA CCATTCCGTC ATTGTGCCGG AGGATCACCC GCTGACGCAG
GAGCGTGTTA TTACGCTAGA GATGCTCAAT GCAGAGCCGC TGATTACCTA TCGTCAGGGA
ATTACCGGTC GCTCGCGTTT GGATCGTGCG TTTCAGGCGG TGGGGATGTC ACCAGATATT
ACGTTGAGCG CGCAGGATTC GGATGTGATT AAAACCTATG TTGAGCTGGG GCTCGGCGTC
GGGATTGTGG CCGATATGTC GTACGATCCC GCGCGCGATA CCGGGTTGGT GCGGTTAAAT
GCCGAGCATT TGTTTGAAGC GAATACCGTC TGGCTGGGGT TAAAAAAGGG TCAGTTACAG
CGTAACTATG CCTGGAAATT TATTCAGCTG TGTAATACAG AACTGTCGCT GGATGAGATT
AAAGATAAGG TGTTCTCGGA TAACGATGAA GCGGTGATTG ATTACCAAAT CTGA
 
Protein sequence
MNFQQLKIIR ESARCNYNLT EVANTLFTSQ SGVSRHIREL EEELGIEIFI RRGKRLLGMT 
EPGKELLVVA ERILNDASNI RRLANVFTNN DTGQLVIATT HTQARYSLPP VIKAFRSLYP
QVRLVLNQGT PDEIVAMLHS GEADIGIASE QLINDPSLAA FSYYRWHHSV IVPEDHPLTQ
ERVITLEMLN AEPLITYRQG ITGRSRLDRA FQAVGMSPDI TLSAQDSDVI KTYVELGLGV
GIVADMSYDP ARDTGLVRLN AEHLFEANTV WLGLKKGQLQ RNYAWKFIQL CNTELSLDEI
KDKVFSDNDE AVIDYQI