Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1394 |
Symbol | |
ID | 8132333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1628952 |
End bp | 1629905 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644864684 |
Product | transcriptional regulator CysB-like protein |
Protein accession | YP_003016976 |
Protein GI | 253687786 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAACTTTC AGCAACTGAA GATTATTCGT GAATCAGCAC GGTGCAATTA CAACCTGACC GAGGTGGCGA ATACGCTGTT TACCTCTCAA TCCGGCGTGA GCCGCCATAT CCGCGAGCTG GAAGAAGAGC TGGGGATTGA AATCTTCATT CGCCGTGGCA AACGCCTGTT AGGTATGACC GAACCGGGAA AAGAGCTGCT GGTGGTGGCG GAGCGCATTC TGAATGACGC CAGCAATATC CGGCGGCTGG CGAATGTTTT CACCAATAAC GATACCGGCC AGTTGGTGAT TGCGACCACG CATACGCAGG CGCGTTACAG CCTGCCGCCG GTGATTAAAG CCTTCCGTTC TCTGTACCCA CAGGTGCGTC TGGTGCTGAA TCAGGGCACG CCGGATGAGA TTGTGGCGAT GCTCCATTCC GGTGAAGCGG ATATCGGTAT TGCCAGTGAG CAGTTGATTA ACGATCCCTC GCTGGCAGCG TTCTCCTACT ATCGCTGGCA CCATTCCGTC ATTGTGCCGG AGGATCACCC GCTGACGCAG GAGCGTGTTA TTACGCTAGA GATGCTCAAT GCAGAGCCGC TGATTACCTA TCGTCAGGGA ATTACCGGTC GCTCGCGTTT GGATCGTGCG TTTCAGGCGG TGGGGATGTC ACCAGATATT ACGTTGAGCG CGCAGGATTC GGATGTGATT AAAACCTATG TTGAGCTGGG GCTCGGCGTC GGGATTGTGG CCGATATGTC GTACGATCCC GCGCGCGATA CCGGGTTGGT GCGGTTAAAT GCCGAGCATT TGTTTGAAGC GAATACCGTC TGGCTGGGGT TAAAAAAGGG TCAGTTACAG CGTAACTATG CCTGGAAATT TATTCAGCTG TGTAATACAG AACTGTCGCT GGATGAGATT AAAGATAAGG TGTTCTCGGA TAACGATGAA GCGGTGATTG ATTACCAAAT CTGA
|
Protein sequence | MNFQQLKIIR ESARCNYNLT EVANTLFTSQ SGVSRHIREL EEELGIEIFI RRGKRLLGMT EPGKELLVVA ERILNDASNI RRLANVFTNN DTGQLVIATT HTQARYSLPP VIKAFRSLYP QVRLVLNQGT PDEIVAMLHS GEADIGIASE QLINDPSLAA FSYYRWHHSV IVPEDHPLTQ ERVITLEMLN AEPLITYRQG ITGRSRLDRA FQAVGMSPDI TLSAQDSDVI KTYVELGLGV GIVADMSYDP ARDTGLVRLN AEHLFEANTV WLGLKKGQLQ RNYAWKFIQL CNTELSLDEI KDKVFSDNDE AVIDYQI
|
| |