| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1372 |
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| Symbol | |
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| ID | 8132311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1600573 |
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| End bp | 1601598 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644864662 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003016954 |
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| Protein GI | 253687764 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0658306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAACA AAGAGTTTAT CTATTCAACT ATGCCTACGT TTTTATTACG TAGCATTAGT
GATGAACTTC TCAATCAAGG AATTGATCCT GAGCGAATTT TTGTCGGCCT CCCTATCACA
TTGCAAGATG TCAATGATCC CTATGTCCGG ATTCCAGTGC TTCATGGACA AACAATTATC
CAGAGAGCCT TACAGCTTTG CCAGTATGAT GGTTTTGGGC TACGGATTGG CGCTAATCAT
ACTATCTCTA CAATGGGACC ACTCTATTTT GCTTTTATTA CTAGCCCAAC GCTCCATCAT
GTATTAGATA CCGGATTAAA ATACCAAGGG CTTATCCATG GGTTACTGCA TTTCTCGTAT
AAGAAAGAAG AGTCGAGAAA TTTTGTATTA TTTGCCCACA GTACATTTCA CCAGATCGAT
ATTCTGACCT TTCTCATTGA GGAGGCTTTT TCATTCTTGC CAAGAATGAT TCAAGAGATG
TCTGCGAAAA ATATGCGGTT GATAAAGATA GAATTTAGTT TTCCTCCGCC TTCTTATGTT
GAGAAATACC GGAAGCAATT CAACTGCGAT TTACATTTTA ACCAGCCGCA TAATGCATTA
TATTTTCAAG AGTCTATTTT ACAATTACCT ATTCCTACTC ATGATCATGT CAATCATAAG
TTGATGTTAG CGTTTCTTGA TCAACTGCTT GAACGTTATT CCGTTCAGAA AGATATTGTT
AATGAGGTAT CCCTTATCCT ACATCGAACG CTGGAAAAAC CGCCAATGTT TGATGCAATA
GCCAGACAGC TTGCAGTAAG TGAACGTACA TTACGGCGTC GACTCGCGGA ATGCGGTAAA
ACGTATCTCA CGCTGTTGGA CGAGATACGT AAAGAGCGTG CCCTGGCATT GCTGTACACC
TCACGATTAT CAATAGAAAA GATTGGCCTT GCGGTAGGGT TTGATGACAT CCGTAGCTTT
AGGCGTGCGT TTACTCGCTG GACCGGCAAG ACGCCCCGTC AACTTCGTGC GCAGCGGCAT
ACCTGA
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| Protein sequence | MKNKEFIYST MPTFLLRSIS DELLNQGIDP ERIFVGLPIT LQDVNDPYVR IPVLHGQTII
QRALQLCQYD GFGLRIGANH TISTMGPLYF AFITSPTLHH VLDTGLKYQG LIHGLLHFSY
KKEESRNFVL FAHSTFHQID ILTFLIEEAF SFLPRMIQEM SAKNMRLIKI EFSFPPPSYV
EKYRKQFNCD LHFNQPHNAL YFQESILQLP IPTHDHVNHK LMLAFLDQLL ERYSVQKDIV
NEVSLILHRT LEKPPMFDAI ARQLAVSERT LRRRLAECGK TYLTLLDEIR KERALALLYT
SRLSIEKIGL AVGFDDIRSF RRAFTRWTGK TPRQLRAQRH T
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