Gene PC1_1364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1364 
SymbolfbpC 
ID8132303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1589941 
End bp1590990 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content54% 
IMG OID644864654 
Productferric transporter ATP-binding subunit 
Protein accessionYP_003016946 
Protein GI253687756 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.741319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATACTG AAAAAAACTT TGTTGAACTG AAGCACGTCA CTAAACGTTT CGGCAACAAC 
ACCGTCATTG ATGATTTGAA TCTGGCGATC CCACAGGGAA AAATGGTCAC GCTGCTGGGG
CCATCTGGCT GCGGTAAAAC CACGGTACTC CGTGCAGTTG CCGGTTTGGA AAAACCGACG
GAAGGCCAGA TTTTCATCGA CGGCGAAGAC GTCACCGAAC GCTCCATTCA ACAGCGTGAT
ATCTGCATGG TGTTCCAGTC TTACGCCCTC TTCCCACACA TGTCGCTGGG AGAAAACATT
GGTTATGGCC TGAAAATGCT TGGTCGTCCG AAGGCGGAAA TCAATCAGCG AGTAAAAGAA
GCGCTGGCGC TGGTGGATCT GGAAGGGTTT GAAGATCGCT ACGTCGACCA GATTTCCGGC
GGACAGCAGC AGCGTGTCGC GCTGGCGCGA GCGCTGATCC TCAAACCGAA AGTCCTGCTG
TTCGATGAGC CACTGAGTAA CCTCGACGCT AACCTGCGCC GCAGTATGCG CGAGAAAATC
CGCGAGCTTC AGCAGCAGTT CAATATCACC TCGCTGTATG TGACGCACGA TCAGAGCGAA
GCCTTTGCGG TGTCGGACAT GGTTCTGGTC ATGAACAAAG GCAAAATCAT GCAGTTGGGT
GCGCCGCAGG AGCTCTACCG CCAGCCGGCT TCCCGCTTCA TGGCCAGCTT TATGGGAGAT
GCCAATATCT TCCCTGCGAC CTTTACGGCA GACAGCGTGA ACATCTATGG CTACCTCATT
CCGCGTCCGC AGGGTTTTGC TGCCGGATTA AGCGAATCGA CCGTTGGTAT TCGCCCGGAA
GCCATTACAC TCAGCCATCA AGGCGAAGAA AGCCAGCGCT GCACGATCAC ACAGGTCGCC
TATATGGGGC CACAGTACGA AGTGCAGGTA GACTGGCACG GACAGTCGAT GCTGTTGCAG
GTTAACGCGA CCCAACTTCA GCCGAATCCG GGCGACAGTT ACTATCTGCA AATTCACCCT
TACGGCATGT TTGTACTGTC CGAGCAGTAA
 
Protein sequence
MNTEKNFVEL KHVTKRFGNN TVIDDLNLAI PQGKMVTLLG PSGCGKTTVL RAVAGLEKPT 
EGQIFIDGED VTERSIQQRD ICMVFQSYAL FPHMSLGENI GYGLKMLGRP KAEINQRVKE
ALALVDLEGF EDRYVDQISG GQQQRVALAR ALILKPKVLL FDEPLSNLDA NLRRSMREKI
RELQQQFNIT SLYVTHDQSE AFAVSDMVLV MNKGKIMQLG APQELYRQPA SRFMASFMGD
ANIFPATFTA DSVNIYGYLI PRPQGFAAGL SESTVGIRPE AITLSHQGEE SQRCTITQVA
YMGPQYEVQV DWHGQSMLLQ VNATQLQPNP GDSYYLQIHP YGMFVLSEQ