Gene PC1_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1362 
SymbollacZ 
ID8132301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1585233 
End bp1588364 
Gene Length3132 bp 
Protein Length1043 aa 
Translation table11 
GC content55% 
IMG OID644864652 
Productbeta-D-galactosidase 
Protein accessionYP_003016944 
Protein GI253687754 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3250] Beta-galactosidase/beta-glucuronidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00215799 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA CCGTTTTGCC GCATCCCGTA CGCCATCGCG CCACGCTGCA AGAAATCCTT 
TCCCGACGCG ATTGGGAAAA CCCAACCTGT ACTCACTACC AGAGGCTTCC TGCACATCCG
CCGTTTAACA GCTGGCGCAG CGTAGCTACC GCACAGCAGG ATGAACCTTC TCAGCGGCTG
CGTCGCCTCA ATGGCGAATG GACGTTTAGC TATTTCACTC GCCCGGAAGC GGTGCCGGAA
AGCTGGTTAC AGCAGGATCT GCCCGATGCC GATACCATCC CAGTGCCTTC CAATTGGCAA
TTACAGGGCT ATGACGCTCC GATTTATACC AACGTAAAAT ACCCGATCCC CGTCACCCCA
CCTTATGTGC AGAAAGACAA TCCCACCGGT TGTTACTCGC TCACTTTTAA GATCAATCAT
GACTGGATCA GCAACGGGCA AACCCGGATT ATCTTTGACG GTGTTAACTC CGCGTTTTAC
CTCTGGTGTA ACGGTCACTG GGTAGGATAT TCGCAGGATA GTCGCCTGCC TGCGGAGTTT
GATATCGGGC GCTATCTGAC AACCGGAGAG AATCGGCTGG CCGTCATGGT GTTACGCTGG
TCTGACGGCA GCTATCTGGA AGATCAGGAT ATGTGGCGTA TGAGCGGTAT TTTCCGCGAT
GTCACGCTTC TGCATAAACC CACGGTTCAC CTCAGAGATA TCCAACTGAC TACGCCGCTC
AGCGCCGATT TCCGCCACGG CACACTGGAG ATTCAAGTGA GGGCAACGCT CACCGAAGCG
GAATCCAAAA GCCATCGTGT CCGTGCACAG CTTTGGCGTG GTAATAAACT CATCGGTGAC
ACACGACAGG CATTCGGCAG CGATATTGTC GATGAACGCG GTGCTTACCA CGATAAGGCT
TTTCTCCGTA TTGACGTGCC ACAGCCCGAT CTGTGGAGCG CCGAACTGCC GCACCTGTAT
CGCACAGTTA TTTCATTGGA AACAGCAGAA GGCGAGCTCG TAGAAGCAGA AGCCTATGAT
GTCGGTTTCA GAAAAGTTGA AATCCGCAAC GGTCTGCTGC TGCTGAACGG TCAACCGCTA
CTGATTCGTG GCGTTAACCG CCATGAGCAT CATCCTCAGC ATGGTCAGGT CATGGATGAA
GACACGATGC GGCGCGATAT TATGCTAATG AAACAGCATA ATTTTAACGC CGTGCGTTGC
TCACATTACC CCAACCATCC GCTGTGGTAT CGGCTGTGCG ATCGTTACGG CCTGTATGTT
GTGGATGAGG CGAACATTGA GACGCACGGC ATGCAGCCAA TGAATCGTCT GTCAGACGAT
CCCGTCTGGC TACCGGCCTA CAGCGAACGC GTGTCGAGGA TGGTACAACG CGACCGCAAT
CATCCCTGCA TTATTATCTG GTCATTGGGG AACGAGTCCG GTTACGGCGC AAATCATGAC
GCACTCTATC AGTGGATCAA GCGCCACGAT CCGACGCGTC CCGTGCATTA CGAAGGCGGC
GGCGCGAACA GTCGTGCGAC CGACATTGTG TGCCCCATGT ACGCCCGCGT CGATGAAGAT
CAGCCCTTCC CCAGCGTGCC CAAATGGTCG ATCACCAAAT GGATCAGCAT GCCGGACGAA
CATCGGCCAC TTATCCTCTG CGAGTACGCA CACGCGATGG GTAACAGTCT GGGGGGATTT
GCTCGCTACT GGCAGGCATT CCGTCAATAC CCTCGGTTAC AGGGCGGATT CATCTGGGAC
TGGGTCGATC AGGCACTGAC CCGCCACGAC GAGCAAGGCA ATGCCTACTG GGCATACGGT
GGAGACTTTG GCGACACACC TAACGATCGT CAGTTCTGTC TGGACGGCTT GCTGTTTCCC
GATCGCACCC CGCATCCCAG CCTGTATGAA GCCCAGCGGG CACAGCAGCA TATTCAGTTC
GACTGGCAGG CGGAGTCACC GTGTGAGCTT CACGTCACCA GCGAATACCT GTTTCGCCAT
ACGGACAATG AGCAGTTGAA CTGGCGCATC ACGCTGGACG ATAAAATGCT CGCAGAAGGT
TCGCTGCCGC TGTCTCTCGC TCCGCAGTCC ACCCAGACCC TCACGCTACT GGAGGCGCTT
CCCGCCGTCG AACACACAGG GGAGCTTTGG CTCAATGTTG AAGTCGTACA GCCTAAAGCC
ACCGCCTGGT CAGAGGCAAA CCACCGCTGC GCCTGGGATC AATGGCAACT CCCTGCGCCA
CTTCATCTTC CCGATACGGC CAGTTCCGGG CAGAAGCAAC GCCCCGTACT GCGATCGTCT
GATGAGCACT TCGATATCGT TCAGGGCGAA CAACGCTGGC ACTTTAACCG CCAGAGCGGC
TGGCTGGAAC AGTGGTGGAC AGCCGACACG CCAGCGCTGT TAACCCCTTT GCAAGATCAG
TTTGTTCGGG CACCGCTGGA TAACGACATC GGTATCAGCG AAGTTGATCG CATCGATCCG
CACGCTTGGG CCGAACGTTG GAAATCAGCC GGTCTTTATC AATTGCAGAC GCAGTGTATA
GCGATTCAAG CTGACCAACT CGACGATGCG GTGCAGGTTA CTACCGAGCA CGTATTCCGC
CATGCCGGAC AAATCTTGCT ACGGAGTAAA AAGCGCTGGC AGATTGATGT ACACGGCGTA
ATGACTGTTG ATGTCGACGT TGATGTCGCG ACGGTACTCC CATCATTAGC CAGAGTGGGC
TTGAGCTGCC AGCTAGCCGA CGTGGCACCT CAGGTCAGTT GGGCCGGGCT TGGGCCACAT
GAGAATTACC CAGACCGACA GTTGGCTGCA CAGCATGGAC ACTGGAGTCT GCCGCTGGAT
GACCTTCATA CGCCCTACAT TTTCCCGTCA GAAAACGGAC TGCGCTGCAA CACTCGCACG
CTAACGTACG GCAAATGGAC AATCACCGGA AATTTCCACT TCGGGTTAAG TCGTTATGGG
TTAACACAGT TAATGACCTG TACTCACCAC CATTTATTAG AAAAGGAAGA AGGTGTTTGG
CTCAATCTGG ATGGCTTCCA TATGGGCATT GGCGGCGATG ATTCCTGGAG TCCCAGCGTT
CATCGCGATG ATTTACTCAC GGCGACACAT TATCACTACC GCGTCGCGCT TCAACATCAC
CAACCGTATT GA
 
Protein sequence
MSDTVLPHPV RHRATLQEIL SRRDWENPTC THYQRLPAHP PFNSWRSVAT AQQDEPSQRL 
RRLNGEWTFS YFTRPEAVPE SWLQQDLPDA DTIPVPSNWQ LQGYDAPIYT NVKYPIPVTP
PYVQKDNPTG CYSLTFKINH DWISNGQTRI IFDGVNSAFY LWCNGHWVGY SQDSRLPAEF
DIGRYLTTGE NRLAVMVLRW SDGSYLEDQD MWRMSGIFRD VTLLHKPTVH LRDIQLTTPL
SADFRHGTLE IQVRATLTEA ESKSHRVRAQ LWRGNKLIGD TRQAFGSDIV DERGAYHDKA
FLRIDVPQPD LWSAELPHLY RTVISLETAE GELVEAEAYD VGFRKVEIRN GLLLLNGQPL
LIRGVNRHEH HPQHGQVMDE DTMRRDIMLM KQHNFNAVRC SHYPNHPLWY RLCDRYGLYV
VDEANIETHG MQPMNRLSDD PVWLPAYSER VSRMVQRDRN HPCIIIWSLG NESGYGANHD
ALYQWIKRHD PTRPVHYEGG GANSRATDIV CPMYARVDED QPFPSVPKWS ITKWISMPDE
HRPLILCEYA HAMGNSLGGF ARYWQAFRQY PRLQGGFIWD WVDQALTRHD EQGNAYWAYG
GDFGDTPNDR QFCLDGLLFP DRTPHPSLYE AQRAQQHIQF DWQAESPCEL HVTSEYLFRH
TDNEQLNWRI TLDDKMLAEG SLPLSLAPQS TQTLTLLEAL PAVEHTGELW LNVEVVQPKA
TAWSEANHRC AWDQWQLPAP LHLPDTASSG QKQRPVLRSS DEHFDIVQGE QRWHFNRQSG
WLEQWWTADT PALLTPLQDQ FVRAPLDNDI GISEVDRIDP HAWAERWKSA GLYQLQTQCI
AIQADQLDDA VQVTTEHVFR HAGQILLRSK KRWQIDVHGV MTVDVDVDVA TVLPSLARVG
LSCQLADVAP QVSWAGLGPH ENYPDRQLAA QHGHWSLPLD DLHTPYIFPS ENGLRCNTRT
LTYGKWTITG NFHFGLSRYG LTQLMTCTHH HLLEKEEGVW LNLDGFHMGI GGDDSWSPSV
HRDDLLTATH YHYRVALQHH QPY