| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1361 |
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| Symbol | lacY |
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| ID | 8132300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1583795 |
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| End bp | 1585057 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644864651 |
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| Product | galactoside permease |
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| Protein accession | YP_003016943 |
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| Protein GI | 253687753 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00882] oligosaccharide:H+ symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.32292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACTACC TACATAATAA GAATTTCTGG ATATTCGGCC TGTTTTTCTT TTTCTACTTC
TTCATCATGG GGGCTTATTT CCCGTTCTTC CCTATTTGGC TTCACGATAT CAACCAAATA
AGTAAAAGCG ACACGGGAAT TATCTTCGCC TGCATCTCCT TTTTTGCTTT GCTATTTCAA
CCTATATTTG GCCTGTTATC CGATAAGTTA GGATTGAGAA AACACCTTCT GTGGATTATT
ACCATTATGC TGGTGTTTTT TGCTCCATTC TTTATTTATG TTTTTGGCCC ATTACTAAAA
TACAACATCG TTTTAGGTTC TATCGTCGGC GGAATTTACC TGGGATTTAT CAACAACGGT
GGCGCACCAG CCATTGAAGC CTACATCGAG AAAGTTAGCC GACGCAGCCA GTTTGAATTT
GGCCGTGCAC GCCTGTTCGG CTGCCTCGGC TGGGCGCTCT GTGCGTCTAT CGTCGGGATT
ATGTTTACCA TCAATAATCA GTTTGTTTTC TGGCTTGGTT CCGCGTGTGC CGTCATCCTC
GCCATCCTGC TGCTGTTGGC AAAACCGGAA GTCTCTTCCA GCGCGTTCGT TGCCGATCAG
GTTGGCTCTA ACCAGAAACC CTTTAGCCTG AAAATGGCAG CCGAGCTGTT AAAAGAACGC
AAGATCTGGT TCCTGACTCT CTATGTCGTC GGCGTGTCAT GCACCTATGA TGTGTTCGAT
CAGCAGTTTG CCAACTTCTT CACGTCGTTT TTCGAAACCC GACAGGAAGG CACAAGAGTA
TTTGGCTACG TCACTACGCT GGGTGAATTG CTTAATGCCA CCATCATGTT TTTTGCACCG
CTAATTGTGA ATCGTATCGG CGGTAAAAAC GCCCTGCTCA TCGCCGGGAC GATTATGTCC
GTACGTATCA TTGGCTCCGC TTTTGCCAGT TCCGTACTGG AAGTGATTGT GCTGAAAACG
CTGCACATGT TTGAAGTGCC GTTCCTGATT GTCGGCTGTT TCAAATACAT CACCACAGTC
TTTGAAGTCC GTTTTTCCGC GACGATTTAT CTGGTGTGCT TCTGCTTCTT TAAACAGATA
TCGATCATTT TCATGTCTAT CTTTGCTGGC AATATGTATG ACAGTATCGG TTTTCATGGC
ACTTACCTGA TTTTAGGCGG CATCGCCCTC TCCTTCACAG CGGTATCCCT ATTCACGCTG
TCGGGAAAAG GGCCGTTATA TGCCTTTTCC GACAAACAAA AAGCGCCAGT GAATACACTC
TAG
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| Protein sequence | MYYLHNKNFW IFGLFFFFYF FIMGAYFPFF PIWLHDINQI SKSDTGIIFA CISFFALLFQ
PIFGLLSDKL GLRKHLLWII TIMLVFFAPF FIYVFGPLLK YNIVLGSIVG GIYLGFINNG
GAPAIEAYIE KVSRRSQFEF GRARLFGCLG WALCASIVGI MFTINNQFVF WLGSACAVIL
AILLLLAKPE VSSSAFVADQ VGSNQKPFSL KMAAELLKER KIWFLTLYVV GVSCTYDVFD
QQFANFFTSF FETRQEGTRV FGYVTTLGEL LNATIMFFAP LIVNRIGGKN ALLIAGTIMS
VRIIGSAFAS SVLEVIVLKT LHMFEVPFLI VGCFKYITTV FEVRFSATIY LVCFCFFKQI
SIIFMSIFAG NMYDSIGFHG TYLILGGIAL SFTAVSLFTL SGKGPLYAFS DKQKAPVNTL
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