| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1334 |
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| Symbol | |
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| ID | 8132272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1552882 |
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| End bp | 1554393 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644864624 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_003016917 |
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| Protein GI | 253687727 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACCG TATCTAACTT CATTCAGGGG GCGATTGCCT CCAGCAACAG CCAACGCTAC
GCCGCGGTGT ATAACCCCGC GACGGGCGAG CAGATTCGCC AGGTTGTGAT GTCTGATAAG
GCGGAAGTCG AGCAGGCAAT TGCCAGTGCG GCGGCGGCAT TCCCTGCGTG GTCAAAACAC
TCTCCGCTGC GTCGCGCGCG CGTGCTGTTT CGCTTCAAAG CGCTGCTGGA AGAACGAATG
GATACGCTGG CTCGGCTGAT TTCACAGGAG CACGGCAAGG TGTATTCCGA TGCCGTGGGA
GAGGTGACGC GCGGTCTGGA AGTCGTTGAA TTTGCCTGTG GCATTCCGCA TCTGCAAAAA
GGCGAACACT CGGCGAATGT CGGCACCGGT GTGGATAGCC ATTCACTCAT GCAGCCACTT
GGCGTGTGTG TCGGGATTAC GCCGTTCAAC TTCCCGGCGA TGGTGCCGAT GTGGATGTTC
CCGATTGCGC TGGCGACCGG CAATACCTTT GTGTTGAAAC CCTCTGAAAA AGATCCGTCG
CTCTCGCTGC TGCTGGCACA ACTGCTGAAA GAAGCGGGCC TGCCGGACGG CGTGTTTAAC
GTCGTTCAGG GGGATAAAGA AGCGGTGGAC GTCCTGCTGA CCGACCCGCG TGTGCAGGCG
GTGAGCTTTG TGGGATCGAC GCCGGTGGCG GAATACATTT ATCAGACGGC ATCGGCGCAC
GGCAAACGCT GTCAGGCGCT GGGCGGGGCG AAAAACCACT GCATCCTGAT GCCGGATGCT
GACATGGACA TGGCGGCCAG CGCGATTATG GGCGCGGCGT TTGGCGCCGC GGGCGAACGC
TGCATGGCGC TGTCGGTGGT GGTCGCTGTT GGCGATGACA CGGCGGAAGC GCTGAATCAG
CGCCTGAACG CACAGATCAA CGCGATGCGT GTCGGACCGG GGCTGGTGGA CGGGCAGGAA
AATGAGATGG GGCCGGTGAT CAGCGCGCCG CACCGGGCGA AGATTGCCGA CTATATTCAA
AGTGGCGTCG ATCAGGGCGC GACGCTGCGT ATCGATGGCC GCACGCTATC TGTTCAAGGG
CATCAGCAAG GCTACTTTAT TGGGCCGACG CTGTTCGATA ACGTCACGCC AGAGATGAAG
ATCTATCAGG AAGAAATTTT TGGTCCGGTA CTGTCCGTGG TGCGCGTGCC GGATTACCTG
ACGGCGGTAA CGCTGATTAA CAACCATGAA TACGGTAACG GTACGGCTAT TTTTACCCGC
GATGGTGAAA CGGCGCGTCA GTTCTGCGAA GAAGTGCAGG CTGGCATGGT TGGCGTGAAC
GTCCCGATTC CTGTGCCGAT GGCGTTCCAC AGCTTCGGCG GCTGGAAACG CTCCATTTTT
GGGCCGCTGA ATGTCCACGG CAACGACGGC GTACGCTTCT ACACCCGAAT GAAAACCGTC
ACCAGCCGCT GGCCCGCCAG CGTCCGTCTG GAACACCACG CCAGCAGCTT CATCATGCCC
ACGCTAGAGT GA
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| Protein sequence | METVSNFIQG AIASSNSQRY AAVYNPATGE QIRQVVMSDK AEVEQAIASA AAAFPAWSKH
SPLRRARVLF RFKALLEERM DTLARLISQE HGKVYSDAVG EVTRGLEVVE FACGIPHLQK
GEHSANVGTG VDSHSLMQPL GVCVGITPFN FPAMVPMWMF PIALATGNTF VLKPSEKDPS
LSLLLAQLLK EAGLPDGVFN VVQGDKEAVD VLLTDPRVQA VSFVGSTPVA EYIYQTASAH
GKRCQALGGA KNHCILMPDA DMDMAASAIM GAAFGAAGER CMALSVVVAV GDDTAEALNQ
RLNAQINAMR VGPGLVDGQE NEMGPVISAP HRAKIADYIQ SGVDQGATLR IDGRTLSVQG
HQQGYFIGPT LFDNVTPEMK IYQEEIFGPV LSVVRVPDYL TAVTLINNHE YGNGTAIFTR
DGETARQFCE EVQAGMVGVN VPIPVPMAFH SFGGWKRSIF GPLNVHGNDG VRFYTRMKTV
TSRWPASVRL EHHASSFIMP TLE
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