Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1327 |
Symbol | |
ID | 8132265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1545545 |
End bp | 1546969 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644864617 |
Product | glycoside hydrolase family 1 |
Protein accession | YP_003016910 |
Protein GI | 253687720 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.294079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATACC GTCATCTTAA ACGTTTCCCT GAGGGGTTTT TGTGGGGCGC GGCGACATCG GCTTATCAGG TTGAAGGGGC ATGGAATGAG GATGGCAAGG GGCCATCGGT GATTGATGCC AGAACGTCCT ATCCTGAGGG CACCACGGAC TTTAAAGTCG CCAGCGATCA TTACCACCGC TACAAGGAAG ATGTGGCGCT GTTTGCCGAT ATCGGCTTTA AAACCTACCG TTTTTCCATC GCCTGGAGCC GCATCATTCC CGATGGCAGC GGTGAGGTAA ACCCGGCGGG CATTGCGTTT TACCACAATC TTATCGATGA ACTGCTGCAT TACGGTATTG TGCCGATCGT TACGATGTAC CATTTCGATC TGCCGCAGGC GTTGCAGGCC AAAGGCGGGT GGTACAGCCG GGAAACGGTG GATGCGTTTG AACGTTTTGC CAACGTACTG TTTGATGAAT ACGGCGAAAA AGTGCAGTAC TGGCTGACCA TCAACGAACA GAACATGATG ATTTTGCACG GTTCCGCACT GGGTACGTTG GATCCCACGC TGGAAAATCC GAAGCAGAAT CTCTACCAAC AGAACCACAA CATGCTGGTG GCACAGGCAA AAGCGATGAA TGCGCTACAT GAAAAAGTGC CCGGCGCGAA AATTGGTCCG GCACCCAACA TTGCGCTGAT TTACCCGGCA TCAGCGAAGC CTGAAGATGT GATGGCCGCG TTCAACTATA ACGCGATTCG CAATTGGTTA TATCTGGATA TGGCGGTGCA CGGCCGTTAC AACACGGCGG CATGGCGCTA TATGGAAGAG AAAGGCTATA CGCCGGAGAT TCTGCCCGGC GATATGGACA TTCTGGCATC GGCCAAACCC GATTTCATCG CGTTTAACTA CTACACCTCG CAAACGGTTG AAGCCAGCAA GGGCGACGGA TCGGATGAAA TTGCACGTGG TGGCGATCAG CACCTGAAAT CAGGTGAAGA AGGCGTACAT CGTGGCGCAA CCAATCCATT TTTGCAGAAA AATGCCTTTG GCTGGGAAAT CGATCCCATC GGTTTCCGCA ATACGCTGCG TGAGCTGCAC GACCGCTACC ATTTACCGCT GATCATTACG GAGAATGGGC TGGGCGCGTT TGATACGCTG GATGAAAACG GTGAGGTTAA CGATGATTAT CGCATCGACT ACCTGCAACG CCACATTGAG CAAATCCAGC TTGCGATCAC TGACGGTGTG GATGTCTTCG GCTATACGCC ATGGTCGGCG TTGGATCTCA TTTCCACCCA TCAGGGATGC TCAAAACGCT ACGGTTTTAT TTACGTGAAC CGTGAAGAGT TCGATCTGAA AGATTTGCGG CGTATCCGTA AAAAAAGCGC ATACTGGTAT GCTAATGTCA TTAAAAACAA TGGGCTGGGT AGCTCAGAAG CGTAA
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Protein sequence | MKYRHLKRFP EGFLWGAATS AYQVEGAWNE DGKGPSVIDA RTSYPEGTTD FKVASDHYHR YKEDVALFAD IGFKTYRFSI AWSRIIPDGS GEVNPAGIAF YHNLIDELLH YGIVPIVTMY HFDLPQALQA KGGWYSRETV DAFERFANVL FDEYGEKVQY WLTINEQNMM ILHGSALGTL DPTLENPKQN LYQQNHNMLV AQAKAMNALH EKVPGAKIGP APNIALIYPA SAKPEDVMAA FNYNAIRNWL YLDMAVHGRY NTAAWRYMEE KGYTPEILPG DMDILASAKP DFIAFNYYTS QTVEASKGDG SDEIARGGDQ HLKSGEEGVH RGATNPFLQK NAFGWEIDPI GFRNTLRELH DRYHLPLIIT ENGLGAFDTL DENGEVNDDY RIDYLQRHIE QIQLAITDGV DVFGYTPWSA LDLISTHQGC SKRYGFIYVN REEFDLKDLR RIRKKSAYWY ANVIKNNGLG SSEA
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