| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1296 |
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| Symbol | |
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| ID | 8132234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1513147 |
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| End bp | 1514283 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644864586 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_003016879 |
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| Protein GI | 253687689 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.660258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAGC ACAAGTTGAA ATTGATACCA ATAGCAGTGT CACTCGTTTT GCTGAGCGGC
TGTACCATAA TTCCCGGTAG CCATCTTTCT ACGAGTGGCA AAGAAGTTAT TGAGCAGCAA
GACGCTGATT TTAATATTGA TAAATTAGTA AATGTTTATC CACTAACACC TTATTTAGTG
GATAAAATGC GGCCAAAGCC ATTGATTGCG CAAACTAACC CTGCGCTAGA ACGTGAACTA
CAACAGTATG AATACCGCAT TGGTATTGGT GATGTCGTCA TGGTTACCGT GTGGGATCAC
CCTGAGCTGA CGACACCTGC TGGTACATAC CGTACTGCTG CGGATACGGG GAACTGGGTG
CACTCTGATG GCACAATTTT CTATCCCTAT ATTGGTAAGG TAAGAGTCGC GGGTAAAACG
GTAACTGAGG TACGTGAAGA AATTACTTCT CGCTTAGCCA CTTATATCGA GTCCCCGCAG
GTTGATGTCA GTATCGCTGC CTTCCGTTCT CAAAAGGCGT ATGTAACCGG TGAAGTGAAA
ACCTCTGGTG AACAATCTAT TACTAATGTG CCATTGACTA TTCTGGATGC GATAAATAAA
GCTGGGGGGT TAAGCGAAGA TGCCGACTGG CGTAATATCG TGTTGACACA TAATGGCCAG
GAAAGGCGAA TCTCCCTTCA AGCGCTAATG CAAAATGGCG ATCTATCCCA AAATACCCTG
CTTTACCCTG GTGATATCCT TTATATTCCC CGTAACGACG ACTTGAAAGT ATTCGTCATG
GGGGAAGTCA AAAAACAAAC CACGCTCAAA ATGGATCGCA GCGGTATGAC TTTGACCGAA
GCACTTGGCA ATGCTGAAGG CATGGATCAA ACGTTGGCTG ATGCAACTGG CGTGTTTGTT
ATTCGTCCGC TTCGAGGAAC TCAGGGACCA AAACTAGCGA ATATCTATCA GCTTAATGCC
GCCGACGCAA CCTCGCTTGT TATGGGCGCT GAATTCCAAT TGCAGCCTTA TGATGTAGTT
TATGTTACGA CTGCACCGAT TGCTCGTTGG AATCGCTTGA TTTCGCAGCT TGCACCTACT
ATCTCCGCCT TTAATGATCT TAGTGAAGGT AGCTTGCGTG TTCGCACCTG GCCATAG
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| Protein sequence | MIKHKLKLIP IAVSLVLLSG CTIIPGSHLS TSGKEVIEQQ DADFNIDKLV NVYPLTPYLV
DKMRPKPLIA QTNPALEREL QQYEYRIGIG DVVMVTVWDH PELTTPAGTY RTAADTGNWV
HSDGTIFYPY IGKVRVAGKT VTEVREEITS RLATYIESPQ VDVSIAAFRS QKAYVTGEVK
TSGEQSITNV PLTILDAINK AGGLSEDADW RNIVLTHNGQ ERRISLQALM QNGDLSQNTL
LYPGDILYIP RNDDLKVFVM GEVKKQTTLK MDRSGMTLTE ALGNAEGMDQ TLADATGVFV
IRPLRGTQGP KLANIYQLNA ADATSLVMGA EFQLQPYDVV YVTTAPIARW NRLISQLAPT
ISAFNDLSEG SLRVRTWP
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