Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1293 |
Symbol | |
ID | 8132231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1509611 |
End bp | 1511197 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644864583 |
Product | Integral membrane protein TerC |
Protein accession | YP_003016876 |
Protein GI | 253687686 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTGGA TCGCTGATCC AACAATATGG GCCGGGTTGG CCACGCTGGT TGTCCTGGAG CTGGTTCTGG GCATTGATAA TCTTATCTTC ATCGCCATTC TGGCTGAGAA ACTACCAAAA GAACAACGCG ATAAAGCCAG AGTCGTCGGT CTATTGCTTG CCCTGATTAT GCGCCTGTGT TTGCTGGCGT CTATTTCCTG GCTGGTATCG TTGACTACCC CCCTCTTCAC GCTCCTTGGG CACACATTCA GCGCTCGTGA TGTCATCATG CTGGTTGGCG GGCTATTCCT GCTCTTTAAA GCCACCATGG AGCTCAACGA ACGCCTCGAA GGGAAAGATG AGGAGCAGCA AGCCCAGCGT AAAGGAGCTC GTTTCTGGCC GGTAGTGGCG CAGATCGTGG TACTGGATGC GATATTCTCA CTGGATTCCG TGATTACCGC CGTCGGCATG ACCGACCATC TGCTGGTAAT GATGTCAGCT GTGACCATTG CCATCTTCCT GATGCTGCTG GCCAGCAAAC CGCTGACCCG CTTTGTCGCT GAACACCCAA CCATCGTCAT CCTGTGTCTC AGCTTCCTGT TGATGATTGG TTTCAGTCTG GTCGCGGATG CCTTTGGCTA TCACATTCCT AAAGGTTATC TCTATGCTGC AATAGGCTTC TCAGTGCTGA TTGAGATGTT TAATCAGGTT TCCATGTTTA ACCGCCGACG CTTTCTTTCC TCTTCGGTTC CGCTACGTCA GCGTACCGCG GAAGTGGTTT TGCGTATTTT GCGCGGCAAC CACGAAGAGG CTGAGCTGGA CAATCAAACT TCGTCGATGA TTGCAGACAA CACCCGGGCG GGTCAGGAGG TGTTCAACCT TCAGGAACGC CGGATGATCA AACGGGTATT GGGACTGGCG CAGCGAACCA TCAGCAGCAT TATGACGTCT CGGCATGATA TCGAGCCGGT TGAGCTGGAT ATAACACAGG AAGCACTCGC TAAACTGCTA ACGACCAATC AGCACTCGCG GCTCGTGGTA ACCGACAGCA AAACCTCTGA CGAGCCGTTG GGGATCGTAT ATGTTGCTGA TTTACTACAA CAGCAGTTGA ACCGTGAGCC GTTTAATCTG CGAATTCTTA TTCATCAGCC GCTGGTTTTC CCTGAGCAAC TTTCTCTTTT GCAGGCTTTA GAACAGTTTA GAGAAGGAAG AACGCATTTT GCGTTCGTCG TTGATGAATT TGGTTCGATG GAAGGGATCG TCACATTAAG TGACGTGATG GAAACCATTG CAGGTAACCT ACCGCGCGAA GGAGAAGATC GCGATGCGCG CCACGGTATT CAGCAGAATG ACGACGGCAG TTGGACCGCA AATGGCTATA TTCCGCTGGA AGACCTGACG ATGTATGTTC CGCTGATGCT AGATGAAAAG CGCGAATACT ATACGTTGGC GGGGCTGTTG ATGGAGCACG CACAGCGGGT TCCACAGGTG GGCGATACAT TATCAATCGA TCGCTATCAG TTCACTATCC TGGCAGTGGA AAGCCATCGA ATCATGGAGG TTCGTATCAC CCCAAACGAC GAACCACAGA CTGATTTTGA AGTGTGA
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Protein sequence | MEWIADPTIW AGLATLVVLE LVLGIDNLIF IAILAEKLPK EQRDKARVVG LLLALIMRLC LLASISWLVS LTTPLFTLLG HTFSARDVIM LVGGLFLLFK ATMELNERLE GKDEEQQAQR KGARFWPVVA QIVVLDAIFS LDSVITAVGM TDHLLVMMSA VTIAIFLMLL ASKPLTRFVA EHPTIVILCL SFLLMIGFSL VADAFGYHIP KGYLYAAIGF SVLIEMFNQV SMFNRRRFLS SSVPLRQRTA EVVLRILRGN HEEAELDNQT SSMIADNTRA GQEVFNLQER RMIKRVLGLA QRTISSIMTS RHDIEPVELD ITQEALAKLL TTNQHSRLVV TDSKTSDEPL GIVYVADLLQ QQLNREPFNL RILIHQPLVF PEQLSLLQAL EQFREGRTHF AFVVDEFGSM EGIVTLSDVM ETIAGNLPRE GEDRDARHGI QQNDDGSWTA NGYIPLEDLT MYVPLMLDEK REYYTLAGLL MEHAQRVPQV GDTLSIDRYQ FTILAVESHR IMEVRITPND EPQTDFEV
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