| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1291 |
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| Symbol | |
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| ID | 8132229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1506083 |
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| End bp | 1507918 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864581 |
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| Product | putative assembly protein |
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| Protein accession | YP_003016874 |
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| Protein GI | 253687684 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGAT TTCTGACGAC GCTGGCAATA CTGCTTGTCG TGCTGGTAGC AGGAATGACG
GCTCTGGTCG TACTGGTTAA CCCGAATGAC TTCCGCGCCT ACATGGTGAA GCAGGTTGAG
GAACGTAGCG GCTATCGTCT CCAGTTGGAC GGCGATCTGC GCTGGCACGT TTGGCCGCAG
CTGAGCATAT TATCCGGCGG AATGTCGTTA AGCGCGCCGG GTTCCAGTGC GCCGATTGTC
AGCGCGGAGA ACATGCGCCT TGATGTGCAA CTGTGGCCAT TGCTGTCGCA CAAGCTCGCG
GTCAAGCAGG TGATGCTGAA AGGGGCGATT ATTCGCCTGA CGCCGGAAAG TGAAGCTAAA
CAGGCCAACA ATGCCCCCAT TGCCCCTGCG GGATCGCAAG CGCCATCTGA AGAACGTCGC
TGGCGGCTGG ATATCGATAA GATAAAAGTC GCCGATAGCC TGTTGATTCT GCAACGCAGC
AATAATGAGC AGATTAATGT GCGCGATATT AATCTTGCTA TGGAGCAGAA CAGCGACCGT
CAGGTCAACA TCGAATTATC AAGCCGTATC AATCGCGATC AGCGCGATAT CGCTTTCTCC
CTTGCCGCAG ATGTCGATTT GCTGCGTTTC CCTCAACAGG TCAATGCCAA TATCACCAAG
CTGGATTTCC AGCTTCAGGG GGCAGAAATA CCGCCTGGCG GTATCAGTGG AACGGGGAGC
GTTCAGGCCA GTTATCAACA GCAGCCTGAA AAAATCACGT TTAGCCAGCT TTCACTTAAT
ACCAATAATA GCCAGTTATC GGGAGCGGGG AGCGTGACGC TGGGTGATAT CCCACATTAC
GATTTGGATC TGTTGTCTGA GAAGCTGGAT TTGGATTCCC TGCTGGGAAT CGAGGTAGTA
AAGGGAAACA GCACGTCCAA GGCACCGGTT AAATCATCCA CTCCCGTCAT TTCGAATGAA
AGTGGATTAA CCAAGCCAGA AAGCGCCTTA CAAGCATTCA CGGCGCGTCT GTCGTTGCAG
GCCGCGACGA TGATCTACCG TGGGCTTGAT GTCCGCCAGT TTACGCTACG AGCAGAGAAT
CAGCCGGGGT TGCTGGATAT TACGACATTG AGCGGTGAAC TGGGCAGTGG GCATTTCTCA
TTACCCGGTA AAGTTGTGAC GAAGCCATCA ACCAACATTA CGTTACGGCC AGAACTCAAG
GACGTTGAGC TGTCCCAACT GATATCCGCA TTTGCGCTGC CCACTGAGAC GGTCAGCGGA
AAATTGTCGA TGGCAGGGCA GTTCAGCGGA AACAGCTTTG CCCTACCTGC GTTGCTCCAG
CAGTGGCAGG GAACGGCGAC GCTGCAGGCC AATAGCGTCC GCCTACAGGG TTTGAATATT
CAGCAAATGG TGCAGATGGC TGTTGCGCGT AGTAATGGCA ATGTGCGAGG GCAAGAGCGC
TACGAACGTT ACACTGAGCT GCAACAGTTG ACGGGAAAAG CCCAACTCAA TGCGGGTAAG
TTACGTCTTA CCGATCTCAA TGGTCGTTCA GAGCTGCTGT CACTCAGCGG TGTTGGGCAA
TTCGATTTGC CCGCTCAGAC ATGTGATGTC AATGTGAATG TCTCTATCAC GCAAGGATGG
CAGGGCGATG AGCAACTGGT TAGCGTGCTG AAAAATACGG CGATCCCATT ACGCGTCTAT
GGCGAGTGGG ATAAATTAAA TTATCAGCTT CAGGTAGACC AGTTGCTGCG TAAACGCCTA
CAGGACGAGC TGAAGAAACG CCTGAATGAC TGGGCCAGCC AAAATCAGCA AAGCCAAAAG
GGCAAAGATC TGAAGCAACT TCTCGATCGC CTTTAA
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| Protein sequence | MRRFLTTLAI LLVVLVAGMT ALVVLVNPND FRAYMVKQVE ERSGYRLQLD GDLRWHVWPQ
LSILSGGMSL SAPGSSAPIV SAENMRLDVQ LWPLLSHKLA VKQVMLKGAI IRLTPESEAK
QANNAPIAPA GSQAPSEERR WRLDIDKIKV ADSLLILQRS NNEQINVRDI NLAMEQNSDR
QVNIELSSRI NRDQRDIAFS LAADVDLLRF PQQVNANITK LDFQLQGAEI PPGGISGTGS
VQASYQQQPE KITFSQLSLN TNNSQLSGAG SVTLGDIPHY DLDLLSEKLD LDSLLGIEVV
KGNSTSKAPV KSSTPVISNE SGLTKPESAL QAFTARLSLQ AATMIYRGLD VRQFTLRAEN
QPGLLDITTL SGELGSGHFS LPGKVVTKPS TNITLRPELK DVELSQLISA FALPTETVSG
KLSMAGQFSG NSFALPALLQ QWQGTATLQA NSVRLQGLNI QQMVQMAVAR SNGNVRGQER
YERYTELQQL TGKAQLNAGK LRLTDLNGRS ELLSLSGVGQ FDLPAQTCDV NVNVSITQGW
QGDEQLVSVL KNTAIPLRVY GEWDKLNYQL QVDQLLRKRL QDELKKRLND WASQNQQSQK
GKDLKQLLDR L
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