Gene PC1_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1289 
Symbol 
ID8132227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1504548 
End bp1505189 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content49% 
IMG OID644864579 
Producturidine kinase 
Protein accessionYP_003016872 
Protein GI253687682 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.731499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATC AGTCTCACCA GTGTGTCATC ATCGGGATCT CGGGAGCGTC CGCTTCGGGT 
AAAAGTCTTA TTTCCAGCAC CTTGTATCGG GAATTACGCG ATCAGGTCGG CGATCAGCAT 
ATCGGGGTGA TATCTGAAGA CAGTTATTAT AAAGATCAAA GCCACCTGAC GATGGAAGAG 
CGGGTTAAAA CTAACTATGA CCACCCGAGC TCAATGGATC ACAGCCTGTT GCTGAAACAT 
TTGCAGATGC TGAAAGCAGG TCAGGCGATT GAAGTTCCGC AGTACAGCTA TGTCGAACAC 
ACCCGCAAGC AGGAAACGGT GCATATTGAG CTGAAAAAGG TCATTATCCT GGAAGGTATC 
CTGCTGTTGA CGGATGCACG TCTGCGCGAT GAGATGAATT TCTCTATTTT TGTCGATACG 
CCGCTGGATA TTTGCCTGCT GCGTCGCATG CGCCGCGACG TGAATGAGCG CGGTCGTTCA 
ATGGATTCCG TGATGGAACA GTATCAGAAG ACCGTGCGCC CGATGTTCCT GCAATTCATT 
GAACCATCCA AGCAATACGC CGACATTATT GTGCCGCGCG GTGGGAAAAA CCGTATTGCG 
ATTGATATTT TGAAAGCCAA GATAAGCCAG TTCTTTGAAT AA
 
Protein sequence
MTDQSHQCVI IGISGASASG KSLISSTLYR ELRDQVGDQH IGVISEDSYY KDQSHLTMEE 
RVKTNYDHPS SMDHSLLLKH LQMLKAGQAI EVPQYSYVEH TRKQETVHIE LKKVIILEGI 
LLLTDARLRD EMNFSIFVDT PLDICLLRRM RRDVNERGRS MDSVMEQYQK TVRPMFLQFI 
EPSKQYADII VPRGGKNRIA IDILKAKISQ FFE