| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1259 |
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| Symbol | |
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| ID | 8132196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1467087 |
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| End bp | 1470224 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864549 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_003016843 |
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| Protein GI | 253687653 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.764101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCCT ACGTGATTCG CTGGTCGCTC AACAATCGCC TGCTGGTTTT GCTGGCGGCG
TTGTTCATGG CGGCGTGGGG GCTGATCTCT CTGCAAAAAA CACCGCTGGA TGCGCTGCCC
GATCTGTCTG ACGTACAGGT CATCATTCGC GTCAGCTATC CGGGTAAGGC GCCGCAGGTG
GTGGAAAATC AGGTGACCTA TCCGCTGACC ACCACCATGC TTTCCGTACC GGGCGCCAAG
ACAGTACGGG GCTTTTCCAT GTTTGGCGAT GCTTACGTCT ATGTGCTGTT TGAAGACGGA
ACCGATCCCT ACTGGGCACG TTCCCGCGTG CTGGAGTACC TCAGTCAGGT GCAATCCAGC
CTGCCTGCTG AGGCCAAAAC CGCTCTTGGC CCGGACGCCA CTGGTGTTGG CTGGATCTAC
GAGTACGCGC TGGTGGATCG TAGCGGCAAA TATAGTCTGG CCGACCTGCG CGGCTTTCAG
GACTGGCTGC TGAAATATGA ACTGAAAACG GTGCCTGATG TGGCAGAAGT CGCCAGCGTG
GGCGGCATGG TCAAGCAATA TCAGATCGTC GTCGATCCAG AACGTATGCG GACGCAGGGC
ATCACCCACC AGCAGATCGT CAGTGCTGTT CAGGCGGCGA ATCAGGAAAA TGGCGGTTCG
GTGCTGGAAC TGGGCGAAGC GGAGTACATG GTACGTACCA CCGGCTACCT GAAAACCGCG
CAAGACTTTA ACCACGTGGT AATCACCACC CGTAACGGCA TCCCCGTGCT GTTGCAGGAT
GTCGCTACGC TCAGAGAAGG GCCAGAGATG CGGCGCGGCA TTGCCGAATT GAATGGTGAA
GGCGAAGTGG CAGGCGGCAT TATCGTTCTG CGCTATGGCA AAAATGCGCT GAATACGCTG
CATGCCGTCA AGGCTCGGTT ACAGGAGATA CAAAAAAGCC TGCCAGTCGG CGTTGAGATC
GTCCCAACTT ACGATCGCTC TCAGCTCATT GAGCATGCTA TCGACACACT CAGCTTCAAA
CTGCTGGAAG AGTTTGTCGT TGTCGCCGTC ATCTGCGCCC TGTTTCTGTT CCACTTCCGC
TCGGCGCTGG TGGCAATCAT CAGTCTACCG TTGGGGATTT TGGGCGCGTT TATCATCATG
CGCTATCAGG GCGTGAACGC GAATATTATG TCGCTGGGCG GTATCGCGAT TGCCATCGGC
GCCATGGTGG ATGCCGCGAT TGTGATGATA GAAAACATGC ATAAAGTCAT TGAGCAGTGG
CGGCATGAAA ACCCCGGCAA ACAGCCACAG AATAACGAAT GGTGGCAGTT AGCGGAACGG
GCTGCGGTTG AAGTGGGACC TGCGCTGTTT TGCAGCCTGC TGATCATTAC GCTGTCGTTT
GTGCCCGTGT TCTCACTGGA AGCGCAGGAA GGCCGCATGT TTTCACCGCT GGCCTTTACC
AAAACCTATG CCATGGCCGT CGCCGCCGGA TTAGGCATTA CGCTGGTTCC GGTATTAATG
GGGTATTTCG TGCGCGGTAA GATACCGGAC GAACAGGCAA ACCCGATTAA CCGTTGGCTG
ATTGCGCTCT ATCATCCGGT GCTGCAAAAA GTGCTGAGCT ACCCGAAGAT CACGTTGCTG
GTTTCCGGCC TGCTATTGCT GCTGACGCTC TTTCCTCTAA GCCGCCTGGG AAGCGAATTT
ATGCCACCGC TGGATGAAGG CGATCTGCTG TATATGCCTT CTACCCTGCC CGGCATCTCC
GCGCGTGAGG CGGGTCGCCT GCTGCAACAA ACGGATCGGC TGATTAAAAC CGTGCCCGAA
GTTGAATCAG TTTTTGGTAA GGCCGGTCGT GCCGAAACGG CAACCGACCC CGCCCCGCTC
ACCATGCTGG AAAGTACGAT TCGACTAAAA CCACGCGACC AATGGCGTGA GGGCATGACC
ATGGACAAGC TGGTGGCCGA GTTGGATCGC ACCGTCAGCC TGCCGGGTAT CGCCAACGTG
TGGGTGCCAC CGATTCGCAA CCGGCTGGAC ATGCTGGCTA CCGGCATTAA AAGCCCGGTT
GGCATCAAGG TCAACGGCAA TAATCTGGCA GACATCGAAC GCACCGCCGA GCAAATCGAG
CAGGTGGTCA AACAGGTTCC TGGCGTGACC TCTGCGCTGG CGGAACGGTT AGCGGGCGGA
CGCTATATCG ATATTGATAT CGACCGGCAA CGCGCCGCAC GCTACGGCGT ATCCGTCGAA
GAGCTTCAGT CGGTGGTCGC CACGCTCATC GGCGGGCAGA ACATCGGTGA AACCATTGAA
GGCCGCCAGC GTTACCCCAT CAATATCCGT TACCCGCGTG AATTACGTGA TTCGCTACAA
AAATTGCGCG ACCTGCCCAT CGTGACGGCA AACGGCAGCA GAGTGACGCT GGCAGAATTG
GCTGATATTC ACGTCAGCGA AGGGCCACCG ATGCTGAAAA GCGAGAACAG TCGTCTGTCG
GACTGGATTT ATGTCGATCT GCGCGGCCGT GACCTGAAAT CCGCCGTTGA AGACATGCAA
CAGGCCGTTG CCCAGCAGGT CACGCTGCCG GAAGGGGTTT CGCTGAGCTG GTCCGGTCAA
TTTGAGTATC TGGAACGCGC CACGGAAAAA ATGAAAGTCG TCGTGCCTTT TACGTTGCTG
ATCATTTTTG TGCTGTTGTA CGTTACCTTC AACCGCATCA AAGATGCCTT GCTGATTATG
GCAACGCTGC CGTTCGCGCT GATTGGCGGC GTCTGGCTGC TCTATATCCT TGGCTATAAT
CTTTCTGTAG CCGGTGCCGT GGGCTTTATT GCACTGGCGG GTGTCTCGGC GGAGTTTGGC
GTCATTATGC TGCTGTACCT CAATCATGCG GTGGAGAAAC ACCGTGTGGC CGGTCAGGCG
CTGTCGCGCC AGCAGTTAAT GGATGCCATC CACGAAGGGG CGGTTCTGCG CGTACGGCCA
AAAATGATGA CCGTAGCGAC GATTATGGCT GGGTTACTCC CCATTATGTG GGGTGGAGGC
AGCGGATCTG AAATCATGCA GCGGATCGCT GCACCGATGA TCGGCGGGAT GGTGAGCGCC
CCCCTGCTGT CTATGCTGGT GATCCCTGCG TTTTATCTGC TATTGCACAA GGGGGAATCC
GGTTTGCTGA AACGGTAA
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| Protein sequence | MIAYVIRWSL NNRLLVLLAA LFMAAWGLIS LQKTPLDALP DLSDVQVIIR VSYPGKAPQV
VENQVTYPLT TTMLSVPGAK TVRGFSMFGD AYVYVLFEDG TDPYWARSRV LEYLSQVQSS
LPAEAKTALG PDATGVGWIY EYALVDRSGK YSLADLRGFQ DWLLKYELKT VPDVAEVASV
GGMVKQYQIV VDPERMRTQG ITHQQIVSAV QAANQENGGS VLELGEAEYM VRTTGYLKTA
QDFNHVVITT RNGIPVLLQD VATLREGPEM RRGIAELNGE GEVAGGIIVL RYGKNALNTL
HAVKARLQEI QKSLPVGVEI VPTYDRSQLI EHAIDTLSFK LLEEFVVVAV ICALFLFHFR
SALVAIISLP LGILGAFIIM RYQGVNANIM SLGGIAIAIG AMVDAAIVMI ENMHKVIEQW
RHENPGKQPQ NNEWWQLAER AAVEVGPALF CSLLIITLSF VPVFSLEAQE GRMFSPLAFT
KTYAMAVAAG LGITLVPVLM GYFVRGKIPD EQANPINRWL IALYHPVLQK VLSYPKITLL
VSGLLLLLTL FPLSRLGSEF MPPLDEGDLL YMPSTLPGIS AREAGRLLQQ TDRLIKTVPE
VESVFGKAGR AETATDPAPL TMLESTIRLK PRDQWREGMT MDKLVAELDR TVSLPGIANV
WVPPIRNRLD MLATGIKSPV GIKVNGNNLA DIERTAEQIE QVVKQVPGVT SALAERLAGG
RYIDIDIDRQ RAARYGVSVE ELQSVVATLI GGQNIGETIE GRQRYPINIR YPRELRDSLQ
KLRDLPIVTA NGSRVTLAEL ADIHVSEGPP MLKSENSRLS DWIYVDLRGR DLKSAVEDMQ
QAVAQQVTLP EGVSLSWSGQ FEYLERATEK MKVVVPFTLL IIFVLLYVTF NRIKDALLIM
ATLPFALIGG VWLLYILGYN LSVAGAVGFI ALAGVSAEFG VIMLLYLNHA VEKHRVAGQA
LSRQQLMDAI HEGAVLRVRP KMMTVATIMA GLLPIMWGGG SGSEIMQRIA APMIGGMVSA
PLLSMLVIPA FYLLLHKGES GLLKR
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