| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1250 |
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| Symbol | |
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| ID | 8132185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1458519 |
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| End bp | 1459028 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644864538 |
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| Product | peptidoglycan-associated outer membrane lipoprotein |
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| Protein accession | YP_003016834 |
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| Protein GI | 253687644 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000441417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAATTCA ATAAAGTGCT GAAAGGCCTG ATGTTGGCTC TGCCGGTACT GGCAGTGGCC
GCTTGTAGCT CCAACAAGAA TGCGGACAAT GACCAATCTT CCATGGGTGC TGGCAACAAC
GGCATGATGG ACGGCGGCAA CATGTCTTCT TCTGAGCAAG CTCGTTTGCA GATGCAAGAA
TTACAGCGCA ACAACATCGT TTACTTCGGT CTGGATAAGT ACGATGTGAG CTCTGAATTC
GCTCAGATGC TGGACGCACA CGCTGCATTC CTGCGTAGCA ACCCGTCTTA CAAAGTGACT
ATCGAAGGTC ACGCGGACGA ACGCGGTACG CCAGAATACA ACATCGCTCT GGGTGAGCGT
CGTGCCAACG CGGTACAAAT GTACCTGCAA GGTAAAGGCG TTTCTTCCGA TCAGATCTCT
ATCGTTTCTT ACGGTAAAGA GAAACCAGCT GTTCTCGGTC ATGACGAAGC GGCATATGCC
AAAAACCGTC GTGCCGTTCT GGTATATTAA
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| Protein sequence | MQFNKVLKGL MLALPVLAVA ACSSNKNADN DQSSMGAGNN GMMDGGNMSS SEQARLQMQE
LQRNNIVYFG LDKYDVSSEF AQMLDAHAAF LRSNPSYKVT IEGHADERGT PEYNIALGER
RANAVQMYLQ GKGVSSDQIS IVSYGKEKPA VLGHDEAAYA KNRRAVLVY
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