Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1242 |
Symbol | |
ID | 8132177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1452574 |
End bp | 1453713 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644864530 |
Product | cytochrome d ubiquinol oxidase, subunit II |
Protein accession | YP_003016826 |
Protein GI | 253687636 |
COG category | [C] Energy production and conversion |
COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.166295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGAAT ATGAAGTCTT ACGTTTTATC TGGTGGCTGT TGATCGGTAT TTTGCTGATT GGCTTCGCTA TCACTGATGG TTTTGACATG GGCGTGGGCA TTCTGGTGCG TCTGATGGGA CGTGGCGATA CCGAGCGTCG TGTCATGATT AACAGTATTG CGCCGCACTG GGACGGTAAC CAGGTCTGGT TGATCACCGC AGGTGGCGCG CTGTTTGCTG CCTGGCCGAT GGTTTACGCG GCTGCGTTCT CCGGTTTCTA CATTGCCATG ATTCTGGTGC TGGCCTCATT GTTCTTCCGT CCTGTCGGCT TCGATTACCG TTCAAAAATC GAAGACCCAC GCTGGCGTGG CATGTGGGAC TGGGGCATCT TCATCGGTAG CTTTGTTCCG CCAGTTGTTA TTGGCGTTGC GTTTGGCAAC CTGTTGCAGG GTGTGCCGTT CCACGTCGAT GAATATCTGC GTCTGTACTA CACCGGAAAC TTCTTCCAGC TGCTGAATCC GTTTGGTCTG TTGGCTGGTG TGGTGAGTCT GACGATGATT CTTGCTCAGG GTGCAACCTA CCTGATGATG CGGACCACGG GCGATCTGCA CGTGCGCTCC AAATCTGCTG CGCAGATTTC CGCGCTGGTA ATGATGGTGG CATTTGCTCT GGCAGGCGTA TGGGTTGTTT ACGGTATTGA TGGTTATGTC GTGACGTCTG CGATTAACAC TGCCGCTGAA TCTAACCCGC TGCGTAAAGA AGTCGTTCAT CAGGCGGGTG CCTGGCTGAT TAACTTCAAT AATCATCCGA TCTTGTGGGC GATTCCTGCT CTGGGCGTAG TATTGCCGGT GCTGACTACT CTTATGGCGC GCGCAGAGAA AGGTGCATGG GCATTCCTGT TCTCTTCTTT GACGATCGCT TGTGTGATTC TGACTGCTGG GATTGCCATG TTCCCGTTCA TCATGCCGTC AGTTACCGTG CCTAACGTCA GCTTGACGAT ATGGGACGCG ACGTCGAGCC TGCTGACGCT GAAAGTGATG ACAGTGGTTG CGATTATTTT CGTACCTATC GTGCTTTCTT ATACCGCATG GTGTTACTAC AAGATGTTCG GTCGCATTAC CAAAGAGCAG ATTGAGCAAA ACACTCACTC TATGTACTAA
|
Protein sequence | MFEYEVLRFI WWLLIGILLI GFAITDGFDM GVGILVRLMG RGDTERRVMI NSIAPHWDGN QVWLITAGGA LFAAWPMVYA AAFSGFYIAM ILVLASLFFR PVGFDYRSKI EDPRWRGMWD WGIFIGSFVP PVVIGVAFGN LLQGVPFHVD EYLRLYYTGN FFQLLNPFGL LAGVVSLTMI LAQGATYLMM RTTGDLHVRS KSAAQISALV MMVAFALAGV WVVYGIDGYV VTSAINTAAE SNPLRKEVVH QAGAWLINFN NHPILWAIPA LGVVLPVLTT LMARAEKGAW AFLFSSLTIA CVILTAGIAM FPFIMPSVTV PNVSLTIWDA TSSLLTLKVM TVVAIIFVPI VLSYTAWCYY KMFGRITKEQ IEQNTHSMY
|
| |