Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1239 |
Symbol | |
ID | 8132174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1447997 |
End bp | 1448869 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644864527 |
Product | succinyl-CoA synthetase subunit alpha |
Protein accession | YP_003016823 |
Protein GI | 253687633 |
COG category | [C] Energy production and conversion |
COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.961959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATTC TGATTAATAA AAATACCAAA GTTATCTGTC AGGGTTTTAC CGGTAGTCAG GGGACATTCC ACTCTGAGCA AGCACTTGCT TACGGTACAC AAATGGTCGG TGGTGTGACG CCGGGTAAAG GCGGTACGGA ACATCTGGGC CTGCCCGTAT TTAATACGGT GCGTGAGGCA GTAGAAGCGA CGGGCGCAAC TGCATCCGTT ATCTACGTTC CGGCTCCGTT CTGTAAAGAT TCCATTCTGG AAGCGATTGA CGCAGGTATC GAACTGATTA TCTGTATCAC CGAAGGTATC CCGACGCTGG ATATGCTGAC GGTGAAAGTC AAACTCGACC AGAGCGGCGT GCGGATGATC GGTCCGAACT GCCCAGGTGT GATCACGCCG GGTGAATGTA AGATCGGTAT TATGCCTGGC CATATCCACC TGCCGGGTAA AGTGGGTATC GTTTCTCGTT CAGGTACGCT GACGTATGAA GCCGTGAAGC AAACGACCGA TGCCGGGCTG GGTCAGTCCA GCTGTGTCGG TATCGGCGGT GACCCGATCC CAGGCTCTAA CTTCATCGAT ATTCTGAAGC TGTTTGAACA GGATCCGCAG ACCGAAGCCA TCGTGATGAT CGGTGAAATC GGCGGTACGG CGGAAGAAGA AGCGGCGGCG TATATTAAAG AACACGTAAC CAAGCCAGTT GTCGGCTACA TTGCGGGTGT GACGGCGCCG AAAGGCAAGC GCATGGGCCA CGCGGGTGCA ATCATCGCGG GTGGTAAAGG TACGGCTGAC GATAAATTCG CGGCGTTAGA AGCAGCGGGT GTTAAAACCG TTCGCAGCCT GGCGGATATC GGTGATGCAG TAAAAGCGAT ATTAGCGCGT TAA
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Protein sequence | MSILINKNTK VICQGFTGSQ GTFHSEQALA YGTQMVGGVT PGKGGTEHLG LPVFNTVREA VEATGATASV IYVPAPFCKD SILEAIDAGI ELIICITEGI PTLDMLTVKV KLDQSGVRMI GPNCPGVITP GECKIGIMPG HIHLPGKVGI VSRSGTLTYE AVKQTTDAGL GQSSCVGIGG DPIPGSNFID ILKLFEQDPQ TEAIVMIGEI GGTAEEEAAA YIKEHVTKPV VGYIAGVTAP KGKRMGHAGA IIAGGKGTAD DKFAALEAAG VKTVRSLADI GDAVKAILAR
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