Gene PC1_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1200 
SymbolasnB 
ID8132135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1399338 
End bp1401002 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content54% 
IMG OID644864488 
Productasparagine synthetase B 
Protein accessionYP_003016784 
Protein GI253687594 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID[TIGR01536] asparagine synthase (glutamine-hydrolyzing) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00336153 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTTCTA TTTTTGGTGT GCTTGATCTG AAAAACGATC CTGTTGAACT GCGTAAGAAA 
GCACTGGAGC TATCTCGTTT AATGCGTCAC CGCGGGCCAG ACTGGTCCGG CGTTTATGCC
AGCGACAAAG CGATTCTGGC TCATGAACGC TTGTCTATCG TTGACGTCAA TACGGGCGCA
CAGCCGCTTT ACAACGCCGA GCGCACCCAC ATTCTGGCCG TTAACGGTGA AATCTATAAC
CATCAGGCAT TGCGCCAGCA ATACGGTGAC CGTTACGCGT TTCAGACTGG CTCCGACTGC
GAAGTGATTC TCGCGCTGTA TCAGGAGAAA GGTCCGGCAT TCCTGGATGA GCTGCGCGGC
ATGTTCGCTT TTGCTCTGTA TGACAGCGAA AAAGACGCCT ACCTGATTGG CCGTGACCAC
CTTGGCATCA TCCCGCTGTA TATGGGCTAC GATGAACACG GCAACCTCTA TGTCGCTTCT
GAAATGAAAG CGCTGGTACC AGTTTGCCGC ACCATCAAAG AATTCCCGGC AGGCAGCTAC
CTGTGGAGCA AAGACGGCGA AATTCGTGAG TATTACCAGC GCGATTGGTT TGATTACGAT
GCCGTAAAAG ACAACGAAAC GGATAAAGAA GCCCTGCGCG ATGCGCTGGA AGAAGCGGTG
AAAAGCCACC TGATGTCTGA CGTGCCTTAC GGCGTGTTGC TCTCTGGCGG CCTGGATTCT
TCCGTTATCT CCGCAATCAC TAAGAAATAT GCCGCACGTC GCGTAGAAGA TGATGAGCGC
AGCGAAGCCT GGTGGCCTCA ATTGCACTCT TTCGCCGTCG GCCTGGAAGG TGCGCCAGAC
TTGAAAGCCG CGCAAGAAGT GGCTGACCAC TTAGGGACTG TGCACCACGA AATTCACTTC
ACCGTGCAGG AAGGGCTGGA TGCCATTCGT GATGTGATTT ACCACATCGA AACCTATGAC
GTCACCACGA TTCGTGCCTC AACGCCAATG TACCTGATGT CGCGTAAAAT CAAAGCGATG
GGCATCAAGA TGGTGCTGTC AGGTGAAGGT TCTGACGAAG TATTCGGCGG CTATCTCTAT
TTCCACAAAG CGCCAAACGC CAAAGAGCTG CATGAAGAAA CCGTGCGTAA ACTGCTGGCA
CTGCACCAGT ACGACTGCGC CCGCGCGAAC AAAGCGATGT CTGCCTGGGG CGTGGAAGCG
CGCGTGCCGT TTCTGGACAA AAACTTCCTT GATGTCGCCA TGCGCATCAA CCCACGCGAC
AAAATGTGTG GCAACGGCAA GATGGAAAAA CACATCCTGC GCGAGTGCTT TGAATCCTAC
CTGCCGCACA GCGTTGCATG GCGTCAGAAA GAGCAGTTCT CTGACGGCGT AGGCTACAGC
TGGATTGATA CGCTGAAAGA AGTAGCGGCT CAGCAGGTTA CCGATCAGCA GTTGGAGACA
GCACGCTTCC GCTTCCCGTA CAACACCCCG GGCTCCAAAG AAGCGTATCT GTACCGTGAA
ATCTTCGAAG AGCTGTTCCC GGTTCCCAGC GCAGCAGAAT GCGTACCGGG TGGCCCATCC
GTCGCCTGTT CGTCTGCCAA AGCGATTGAG TGGGATGAAT CTTTCAAGAA ACTGGATGAT
CCATCAGGCC GTGCGGTTGG CGTACACCAG TCAGCCTACA AATAA
 
Protein sequence
MCSIFGVLDL KNDPVELRKK ALELSRLMRH RGPDWSGVYA SDKAILAHER LSIVDVNTGA 
QPLYNAERTH ILAVNGEIYN HQALRQQYGD RYAFQTGSDC EVILALYQEK GPAFLDELRG
MFAFALYDSE KDAYLIGRDH LGIIPLYMGY DEHGNLYVAS EMKALVPVCR TIKEFPAGSY
LWSKDGEIRE YYQRDWFDYD AVKDNETDKE ALRDALEEAV KSHLMSDVPY GVLLSGGLDS
SVISAITKKY AARRVEDDER SEAWWPQLHS FAVGLEGAPD LKAAQEVADH LGTVHHEIHF
TVQEGLDAIR DVIYHIETYD VTTIRASTPM YLMSRKIKAM GIKMVLSGEG SDEVFGGYLY
FHKAPNAKEL HEETVRKLLA LHQYDCARAN KAMSAWGVEA RVPFLDKNFL DVAMRINPRD
KMCGNGKMEK HILRECFESY LPHSVAWRQK EQFSDGVGYS WIDTLKEVAA QQVTDQQLET
ARFRFPYNTP GSKEAYLYRE IFEELFPVPS AAECVPGGPS VACSSAKAIE WDESFKKLDD
PSGRAVGVHQ SAYK