Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1200 |
Symbol | asnB |
ID | 8132135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1399338 |
End bp | 1401002 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644864488 |
Product | asparagine synthetase B |
Protein accession | YP_003016784 |
Protein GI | 253687594 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00336153 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTTCTA TTTTTGGTGT GCTTGATCTG AAAAACGATC CTGTTGAACT GCGTAAGAAA GCACTGGAGC TATCTCGTTT AATGCGTCAC CGCGGGCCAG ACTGGTCCGG CGTTTATGCC AGCGACAAAG CGATTCTGGC TCATGAACGC TTGTCTATCG TTGACGTCAA TACGGGCGCA CAGCCGCTTT ACAACGCCGA GCGCACCCAC ATTCTGGCCG TTAACGGTGA AATCTATAAC CATCAGGCAT TGCGCCAGCA ATACGGTGAC CGTTACGCGT TTCAGACTGG CTCCGACTGC GAAGTGATTC TCGCGCTGTA TCAGGAGAAA GGTCCGGCAT TCCTGGATGA GCTGCGCGGC ATGTTCGCTT TTGCTCTGTA TGACAGCGAA AAAGACGCCT ACCTGATTGG CCGTGACCAC CTTGGCATCA TCCCGCTGTA TATGGGCTAC GATGAACACG GCAACCTCTA TGTCGCTTCT GAAATGAAAG CGCTGGTACC AGTTTGCCGC ACCATCAAAG AATTCCCGGC AGGCAGCTAC CTGTGGAGCA AAGACGGCGA AATTCGTGAG TATTACCAGC GCGATTGGTT TGATTACGAT GCCGTAAAAG ACAACGAAAC GGATAAAGAA GCCCTGCGCG ATGCGCTGGA AGAAGCGGTG AAAAGCCACC TGATGTCTGA CGTGCCTTAC GGCGTGTTGC TCTCTGGCGG CCTGGATTCT TCCGTTATCT CCGCAATCAC TAAGAAATAT GCCGCACGTC GCGTAGAAGA TGATGAGCGC AGCGAAGCCT GGTGGCCTCA ATTGCACTCT TTCGCCGTCG GCCTGGAAGG TGCGCCAGAC TTGAAAGCCG CGCAAGAAGT GGCTGACCAC TTAGGGACTG TGCACCACGA AATTCACTTC ACCGTGCAGG AAGGGCTGGA TGCCATTCGT GATGTGATTT ACCACATCGA AACCTATGAC GTCACCACGA TTCGTGCCTC AACGCCAATG TACCTGATGT CGCGTAAAAT CAAAGCGATG GGCATCAAGA TGGTGCTGTC AGGTGAAGGT TCTGACGAAG TATTCGGCGG CTATCTCTAT TTCCACAAAG CGCCAAACGC CAAAGAGCTG CATGAAGAAA CCGTGCGTAA ACTGCTGGCA CTGCACCAGT ACGACTGCGC CCGCGCGAAC AAAGCGATGT CTGCCTGGGG CGTGGAAGCG CGCGTGCCGT TTCTGGACAA AAACTTCCTT GATGTCGCCA TGCGCATCAA CCCACGCGAC AAAATGTGTG GCAACGGCAA GATGGAAAAA CACATCCTGC GCGAGTGCTT TGAATCCTAC CTGCCGCACA GCGTTGCATG GCGTCAGAAA GAGCAGTTCT CTGACGGCGT AGGCTACAGC TGGATTGATA CGCTGAAAGA AGTAGCGGCT CAGCAGGTTA CCGATCAGCA GTTGGAGACA GCACGCTTCC GCTTCCCGTA CAACACCCCG GGCTCCAAAG AAGCGTATCT GTACCGTGAA ATCTTCGAAG AGCTGTTCCC GGTTCCCAGC GCAGCAGAAT GCGTACCGGG TGGCCCATCC GTCGCCTGTT CGTCTGCCAA AGCGATTGAG TGGGATGAAT CTTTCAAGAA ACTGGATGAT CCATCAGGCC GTGCGGTTGG CGTACACCAG TCAGCCTACA AATAA
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Protein sequence | MCSIFGVLDL KNDPVELRKK ALELSRLMRH RGPDWSGVYA SDKAILAHER LSIVDVNTGA QPLYNAERTH ILAVNGEIYN HQALRQQYGD RYAFQTGSDC EVILALYQEK GPAFLDELRG MFAFALYDSE KDAYLIGRDH LGIIPLYMGY DEHGNLYVAS EMKALVPVCR TIKEFPAGSY LWSKDGEIRE YYQRDWFDYD AVKDNETDKE ALRDALEEAV KSHLMSDVPY GVLLSGGLDS SVISAITKKY AARRVEDDER SEAWWPQLHS FAVGLEGAPD LKAAQEVADH LGTVHHEIHF TVQEGLDAIR DVIYHIETYD VTTIRASTPM YLMSRKIKAM GIKMVLSGEG SDEVFGGYLY FHKAPNAKEL HEETVRKLLA LHQYDCARAN KAMSAWGVEA RVPFLDKNFL DVAMRINPRD KMCGNGKMEK HILRECFESY LPHSVAWRQK EQFSDGVGYS WIDTLKEVAA QQVTDQQLET ARFRFPYNTP GSKEAYLYRE IFEELFPVPS AAECVPGGPS VACSSAKAIE WDESFKKLDD PSGRAVGVHQ SAYK
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